RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 RBM34P42696 430 aaKnown RBP15.32■□□□□ 0.04
HDAC6-235ENST00000495515 YAP1P46937 504 aaKnown RBP15.32■□□□□ 0.04
HDAC6-235ENST00000495515 MFSD13AQ14CX5 517 aa15.32■□□□□ 0.04
HDAC6-235ENST00000495515 RNPS1Q15287 305 aaKnown RBP15.32■□□□□ 0.04
HDAC6-235ENST00000495515 FAM98BQ52LJ0 330 aaKnown RBP15.32■□□□□ 0.04
HDAC6-235ENST00000495515 XKRXQ6PP77 449 aa15.32■□□□□ 0.04
HDAC6-235ENST00000495515 LINC00114Q6XXX2 140 aa15.32■□□□□ 0.04
HDAC6-235ENST00000495515 SEM1Q6ZVN7 128 aa15.32■□□□□ 0.04
HDAC6-235ENST00000495515 OFCC1Q8IZS5 231 aa15.32■□□□□ 0.04
HDAC6-235ENST00000495515 FAM86B1Q8N7N1 296 aa15.32■□□□□ 0.04
HDAC6-235ENST00000495515 C9orf106Q8NAJ2 232 aa15.32■□□□□ 0.04
HDAC6-235ENST00000495515 HS6ST2Q96MM7 605 aa15.32■□□□□ 0.04
HDAC6-235ENST00000495515 ZNF300Q96RE9 604 aaPredicted RBP15.32■□□□□ 0.04
HDAC6-235ENST00000495515 SRXN1Q9BYN0 137 aa15.32■□□□□ 0.04
HDAC6-235ENST00000495515 MAGIXQ9H6Y5 334 aa15.32■□□□□ 0.04
HDAC6-235ENST00000495515 GLRX2Q9NS18 164 aa15.32■□□□□ 0.04
HDAC6-235ENST00000495515 SLC7A8Q9UHI5 535 aa15.32■□□□□ 0.04
HDAC6-235ENST00000495515 A4GNTQ9UNA3 340 aa15.32■□□□□ 0.04
HDAC6-235ENST00000495515 POMPQ9Y244 141 aa15.32■□□□□ 0.04
HDAC6-235ENST00000495515 ASH1LQ9NR48 2969 aaKnown RBP15.32■□□□□ 0.04
HDAC6-235ENST00000495515 CIB2O75838 187 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 PLGP00747 810 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-235ENST00000495515 FABP3P05413 133 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 TMIGD3P0DMS9 266 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-235ENST00000495515 AGAP20933 346 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 AGFG1P52594 562 aaKnown RBP15.31■□□□□ 0.04
HDAC6-235ENST00000495515 SMIM11AP58511 58 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 ADORA2A-AS1P86434 159 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 CHRNB3Q05901 458 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 TRAM2Q15035 370 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 OR7A5Q15622 319 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 FAM69AQ5T7M9 428 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 ASRGL1Q7L266 308 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 FCRLAQ7L513 359 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 YTHDF3Q7Z739 585 aaKnown RBP15.31■□□□□ 0.04
HDAC6-235ENST00000495515 MRGPRGQ86SM5 289 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 ZNF808Q8N4W9 903 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-235ENST00000495515 OR6S1Q8NH40 331 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 MFSD8Q8NHS3 518 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 SSC4DQ8WTU2 575 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 C7orf34Q96L11 122 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 ZNF347Q96SE7 839 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 SEPHS2Q99611 448 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 KLHL4Q9C0H6 718 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 RNF122Q9H9V4 155 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 IL1RAPQ9NPH3 570 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 NDUFAF4Q9P032 175 aa15.31■□□□□ 0.04
HDAC6-235ENST00000495515 FLNBO75369 2602 aaKnown RBP15.31■□□□□ 0.04
HDAC6-235ENST00000495515 IGKV1D-42A0A075B6H8 117 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 TCRBV5S2A0A599 114 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 LIPT2A6NK58 231 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 KDM4EB2RXH2 506 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-235ENST00000495515 hCG_2039718K7EN88 272 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 ZG16O60844 167 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 AQP8O94778 261 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 TOXO94900 526 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 LYPD3O95274 346 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 LDLRP01130 860 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 THY1P04216 161 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 SEMG1P04279 462 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 UMPSP11172 480 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 IMPDH2P12268 514 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 FPR1P21462 350 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 CTSSP25774 331 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 CHRNB4P30926 498 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 OPRM1P35372 400 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 RPS5P46782 204 aaKnown RBP15.3■□□□□ 0.04
HDAC6-235ENST00000495515 VLDLRP98155 873 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 EGR4Q05215 589 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 PAQR6Q6TCH4 344 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 NCCRP1Q6ZVX7 275 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-235ENST00000495515 TSPYL5Q86VY4 417 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-235ENST00000495515 SPATA24Q86W54 205 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 C10orf53Q8N6V4 93 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 PIGXQ8TBF5 258 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 RNF128Q8TEB7 428 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 ROBO4Q8WZ75 1007 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 SDCCAG3Q96C92 435 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 INTS12Q96CB8 462 aaKnown RBP15.3■□□□□ 0.04
HDAC6-235ENST00000495515 KTI12Q96EK9 354 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-235ENST00000495515 DNAJA3Q96EY1 480 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 GMPPAQ96IJ6 420 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-235ENST00000495515 PIP5K1AQ99755 562 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 TACO1Q9BSH4 297 aaKnown RBP15.3■□□□□ 0.04
HDAC6-235ENST00000495515 ZNF426Q9BUY5 554 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 SFXN3Q9BWM7 321 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 ANKRD19PQ9H560 264 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 GP6Q9HCN6 339 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 KLHL9Q9P2J3 617 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 ZNF629Q9UEG4 869 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-235ENST00000495515 RNF6Q9Y252 685 aa15.3■□□□□ 0.04
HDAC6-235ENST00000495515 A0A0G2JNJ9 132 aa15.29■□□□□ 0.04
HDAC6-235ENST00000495515 CLEC18AA5D8T8 446 aa15.29■□□□□ 0.04
HDAC6-235ENST00000495515 HTR3EA5X5Y0 456 aa15.29■□□□□ 0.04
HDAC6-235ENST00000495515 J3KTA2 159 aa15.29■□□□□ 0.04
HDAC6-235ENST00000495515 DVL2O14641 736 aa15.29■□□□□ 0.04
HDAC6-235ENST00000495515 IL18BPO95998 194 aa15.29■□□□□ 0.04
HDAC6-235ENST00000495515 H1F0P07305 194 aaKnown RBP15.29■□□□□ 0.04
HDAC6-235ENST00000495515 CTBP2P56545 445 aa15.29■□□□□ 0.04
HDAC6-235ENST00000495515 PLXDC2Q6UX71 529 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms