RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 FKBP9P1Q75LS8 142 aa17.35■□□□□ 0.37
HDAC4-212ENST00000495497 CCDC103Q8IW40 242 aa17.35■□□□□ 0.37
HDAC4-212ENST00000495497 MCEMP1Q8IX19 187 aa17.35■□□□□ 0.37
HDAC4-212ENST00000495497 STK35Q8TDR2 534 aa17.35■□□□□ 0.37
HDAC4-212ENST00000495497 ZFP3Q96NJ6 502 aa17.35■□□□□ 0.37
HDAC4-212ENST00000495497 AMBRA1Q9C0C7 1298 aa17.35■□□□□ 0.37
HDAC4-212ENST00000495497 GORASP2Q9H8Y8 452 aa17.35■□□□□ 0.37
HDAC4-212ENST00000495497 KCNJ16Q9NPI9 418 aa17.35■□□□□ 0.37
HDAC4-212ENST00000495497 MAGEL2Q9UJ55 1249 aa17.35■□□□□ 0.37
HDAC4-212ENST00000495497 V9GYQ6 96 aa17.35■□□□□ 0.37
HDAC4-212ENST00000495497 TRAPPC13A5PLN9 417 aa17.34■□□□□ 0.37
HDAC4-212ENST00000495497 LIPT2A6NK58 231 aa17.34■□□□□ 0.37
HDAC4-212ENST00000495497 PRSS44E7EML9 344 aa17.34■□□□□ 0.37
HDAC4-212ENST00000495497 J3KTA2 159 aa17.34■□□□□ 0.37
HDAC4-212ENST00000495497 RAMP1O60894 148 aa17.34■□□□□ 0.37
HDAC4-212ENST00000495497 PLGP00747 810 aaPredicted RBP17.34■□□□□ 0.37
HDAC4-212ENST00000495497 OPRM1P35372 400 aa17.34■□□□□ 0.37
HDAC4-212ENST00000495497 RPS5P46782 204 aaKnown RBP17.34■□□□□ 0.37
HDAC4-212ENST00000495497 TAS2R41P59536 307 aa17.34■□□□□ 0.37
HDAC4-212ENST00000495497 BNIP1Q12981 228 aa17.34■□□□□ 0.37
HDAC4-212ENST00000495497 GUSBP1Q15486 140 aa17.34■□□□□ 0.37
HDAC4-212ENST00000495497 LRRK2Q5S007 2527 aa17.34■□□□□ 0.37
HDAC4-212ENST00000495497 MAMDC2Q7Z304 686 aaPredicted RBP17.34■□□□□ 0.37
HDAC4-212ENST00000495497 GDF7Q7Z4P5 450 aa17.34■□□□□ 0.37
HDAC4-212ENST00000495497 TAAR8Q969N4 342 aa17.34■□□□□ 0.37
HDAC4-212ENST00000495497 ZNF775Q96BV0 537 aaPredicted RBP17.34■□□□□ 0.37
HDAC4-212ENST00000495497 STARD4Q96DR4 205 aa17.34■□□□□ 0.37
HDAC4-212ENST00000495497 SLC41A3Q96GZ6 507 aa17.34■□□□□ 0.37
HDAC4-212ENST00000495497 THTPAQ9BU02 230 aa17.34■□□□□ 0.37
HDAC4-212ENST00000495497 PTDSS2Q9BVG9 487 aa17.34■□□□□ 0.37
HDAC4-212ENST00000495497 SFXN3Q9BWM7 321 aa17.34■□□□□ 0.37
HDAC4-212ENST00000495497 KLHL13Q9P2N7 655 aa17.34■□□□□ 0.37
HDAC4-212ENST00000495497 PLEKHB1Q9UF11 243 aaPredicted RBP17.34■□□□□ 0.37
HDAC4-212ENST00000495497 RPS6KA6Q9UK32 745 aa17.34■□□□□ 0.37
HDAC4-212ENST00000495497 TRAPPC4Q9Y296 219 aa17.34■□□□□ 0.37
HDAC4-212ENST00000495497 BAHCC1Q9P281 2608 aa17.34■□□□□ 0.37
HDAC4-212ENST00000495497 DOPEY1Q5JWR5 2465 aa17.33■□□□□ 0.37
HDAC4-212ENST00000495497 EEF1E1-BLOC1S5C9J1V9 151 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 GYG2O15488 501 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 EEF1E1O43324 174 aaKnown RBP17.33■□□□□ 0.36
HDAC4-212ENST00000495497 CHP2O43745 196 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 PRKD3O94806 890 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 IL18BPO95998 194 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 FUT4P22083 530 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 CBLP22681 906 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 SLC35A1P78382 337 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 SLC25A35Q3KQZ1 300 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 SPATS1Q496A3 300 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 CYP2R1Q6VVX0 501 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 LINC00114Q6XXX2 140 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 BTLAQ7Z6A9 289 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 LUZP2Q86TE4 346 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 NKAIN4Q8IVV8 208 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 TUSC5Q8IXB3 177 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 GEMIN6Q8WXD5 167 aaKnown RBP17.33■□□□□ 0.36
HDAC4-212ENST00000495497 SLC25A36Q96CQ1 311 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 GMPPAQ96IJ6 420 aaPredicted RBP17.33■□□□□ 0.36
HDAC4-212ENST00000495497 NSMCE2Q96MF7 247 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 PRSS27Q9BQR3 290 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 TAPBPLQ9BX59 468 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 RHCGQ9UBD6 479 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 RIMS3Q9UJD0 308 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 ING1Q9UK53 422 aaPredicted RBP17.33■□□□□ 0.36
HDAC4-212ENST00000495497 PRPF19Q9UMS4 504 aaKnown RBP17.33■□□□□ 0.36
HDAC4-212ENST00000495497 DOCK7Q96N67 2140 aa17.33■□□□□ 0.36
HDAC4-212ENST00000495497 CYTIPO60759 359 aa17.32■□□□□ 0.36
HDAC4-212ENST00000495497 SS18L1O75177 396 aaPredicted RBP17.32■□□□□ 0.36
HDAC4-212ENST00000495497 AKR7A3O95154 331 aa17.32■□□□□ 0.36
HDAC4-212ENST00000495497 AHSA1O95433 338 aa17.32■□□□□ 0.36
HDAC4-212ENST00000495497 IFNW1P05000 195 aa17.32■□□□□ 0.36
HDAC4-212ENST00000495497 GPIP06744 558 aa17.32■□□□□ 0.36
HDAC4-212ENST00000495497 CRHP06850 196 aa17.32■□□□□ 0.36
HDAC4-212ENST00000495497 ATP6V1B2P21281 511 aa17.32■□□□□ 0.36
HDAC4-212ENST00000495497 MS4A2Q01362 244 aa17.32■□□□□ 0.36
HDAC4-212ENST00000495497 TFF3Q07654 80 aa17.32■□□□□ 0.36
HDAC4-212ENST00000495497 RASGEF1BQ0VAM2 473 aa17.32■□□□□ 0.36
HDAC4-212ENST00000495497 SWT1Q5T5J6 900 aaKnown RBP17.32■□□□□ 0.36
HDAC4-212ENST00000495497 GTF2IRD2BQ6EKJ0 949 aa17.32■□□□□ 0.36
HDAC4-212ENST00000495497 FAM214BQ7L5A3 538 aa17.32■□□□□ 0.36
HDAC4-212ENST00000495497 TSEN54Q7Z6J9 526 aaKnown RBP17.32■□□□□ 0.36
HDAC4-212ENST00000495497 GTF2IRD2Q86UP8 949 aa17.32■□□□□ 0.36
HDAC4-212ENST00000495497 ARHGAP24Q8N264 748 aa17.32■□□□□ 0.36
HDAC4-212ENST00000495497 TMEM99Q8N816 258 aa17.32■□□□□ 0.36
HDAC4-212ENST00000495497 ZHX1-C8orf76Q96EF9 292 aa17.32■□□□□ 0.36
HDAC4-212ENST00000495497 ZNF300Q96RE9 604 aaPredicted RBP17.32■□□□□ 0.36
HDAC4-212ENST00000495497 PSD2Q9BQI7 771 aa17.32■□□□□ 0.36
HDAC4-212ENST00000495497 BTBD10Q9BSF8 475 aa17.32■□□□□ 0.36
HDAC4-212ENST00000495497 OPN3Q9H1Y3 402 aaPredicted RBP17.32■□□□□ 0.36
HDAC4-212ENST00000495497 A4GNTQ9UNA3 340 aa17.32■□□□□ 0.36
HDAC4-212ENST00000495497 SAMD4AQ9UPU9 718 aaKnown RBP17.32■□□□□ 0.36
HDAC4-212ENST00000495497 KLF2Q9Y5W3 355 aaPredicted RBP17.32■□□□□ 0.36
HDAC4-212ENST00000495497 DOPEY2Q9Y3R5 2298 aa17.32■□□□□ 0.36
HDAC4-212ENST00000495497 TRAV36DV7A0A075B6V5 113 aa17.31■□□□□ 0.36
HDAC4-212ENST00000495497 FTCDNL1E5RQL4 147 aa17.31■□□□□ 0.36
HDAC4-212ENST00000495497 SMNDC1O75940 238 aaKnown RBP eCLIP17.31■□□□□ 0.36
HDAC4-212ENST00000495497 OR5F1O95221 314 aa17.31■□□□□ 0.36
HDAC4-212ENST00000495497 CGAP01215 116 aa17.31■□□□□ 0.36
HDAC4-212ENST00000495497 AGTR1P30556 359 aa17.31■□□□□ 0.36
HDAC4-212ENST00000495497 CTBP2P56545 445 aa17.31■□□□□ 0.36
HDAC4-212ENST00000495497 H3F3AP84243 136 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms