RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 NAGAP17050 411 aa14.85□□□□□ -0.03
CBX4-204ENST00000495122 NRG3P56975 720 aa14.85□□□□□ -0.03
CBX4-204ENST00000495122 MED22Q15528 200 aa14.85□□□□□ -0.03
CBX4-204ENST00000495122 ZNF829Q3KNS6 432 aaPredicted RBP14.85□□□□□ -0.03
CBX4-204ENST00000495122 C1orf189Q5VU69 101 aa14.85□□□□□ -0.03
CBX4-204ENST00000495122 ZNF385CQ66K41 422 aaPredicted RBP14.85□□□□□ -0.03
CBX4-204ENST00000495122 C9orf40Q8IXQ3 194 aa14.85□□□□□ -0.03
CBX4-204ENST00000495122 PFN4Q8NHR9 129 aa14.85□□□□□ -0.03
CBX4-204ENST00000495122 NUBPLQ8TB37 319 aa14.85□□□□□ -0.03
CBX4-204ENST00000495122 RNF217Q8TC41 542 aa14.85□□□□□ -0.03
CBX4-204ENST00000495122 DYNC2LI1Q8TCX1 351 aa14.85□□□□□ -0.03
CBX4-204ENST00000495122 GRHL3Q8TE85 626 aa14.85□□□□□ -0.03
CBX4-204ENST00000495122 BORCS5Q969J3 196 aa14.85□□□□□ -0.03
CBX4-204ENST00000495122 C3orf49Q96BT1 292 aa14.85□□□□□ -0.03
CBX4-204ENST00000495122 CLIP3Q96DZ5 547 aa14.85□□□□□ -0.03
CBX4-204ENST00000495122 WDR54Q9H977 334 aa14.85□□□□□ -0.03
CBX4-204ENST00000495122 MEPEQ9NQ76 525 aaPredicted RBP14.85□□□□□ -0.03
CBX4-204ENST00000495122 INPP5EQ9NRR6 644 aa14.85□□□□□ -0.03
CBX4-204ENST00000495122 SLC22A11Q9NSA0 550 aa14.85□□□□□ -0.03
CBX4-204ENST00000495122 CCDC59Q9P031 241 aaKnown RBP14.85□□□□□ -0.03
CBX4-204ENST00000495122 KLHL21Q9UJP4 597 aa14.85□□□□□ -0.03
CBX4-204ENST00000495122 SEC16AO15027 2179 aa14.85□□□□□ -0.03
CBX4-204ENST00000495122 OR6C70A6NIJ9 312 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 SLC22A31A6NKX4 558 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 RIIAD1A6NNX1 92 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 A8MUA0 341 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 TERTO14746 1132 aaKnown RBP14.84□□□□□ -0.03
CBX4-204ENST00000495122 CPNE3O75131 537 aaKnown RBP14.84□□□□□ -0.03
CBX4-204ENST00000495122 ALOX12BO75342 701 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 NDUFB2O95178 105 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 PEPDP12955 493 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 PAICSP22234 425 aaKnown RBP14.84□□□□□ -0.03
CBX4-204ENST00000495122 GAS1P54826 345 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 WNT4P56705 351 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 ACSM1Q08AH1 577 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 PLCXD2Q0VAA5 305 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 POU4F2Q12837 409 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 NNATQ16517 81 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 CRTC2Q53ET0 693 aaPredicted RBP14.84□□□□□ -0.03
CBX4-204ENST00000495122 CLEC12AQ5QGZ9 265 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 PRAMEF17Q5VTA0 474 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 CXXC5Q7LFL8 322 aaKnown RBP14.84□□□□□ -0.03
CBX4-204ENST00000495122 ANKRD37Q7Z713 158 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 OAFQ86UD1 273 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 CADM2Q8N3J6 435 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 AMER2Q8N7J2 671 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 EFHD2Q96C19 240 aaPredicted RBP14.84□□□□□ -0.03
CBX4-204ENST00000495122 RNF31Q96EP0 1072 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 SH3GL3Q99963 347 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 SLC25A18Q9H1K4 315 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 C20orf141Q9NUB4 165 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 CTSFQ9UBX1 484 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 TUBD1Q9UJT1 453 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 OSGIN1Q9UJX0 560 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 SLC6A5Q9Y345 797 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 ZNF337Q9Y3M9 751 aa14.84□□□□□ -0.03
CBX4-204ENST00000495122 CDC40O60508 579 aaKnown RBP eCLIP14.83□□□□□ -0.04
CBX4-204ENST00000495122 REM1O75628 298 aa14.83□□□□□ -0.04
CBX4-204ENST00000495122 IGHA1P01876 353 aa14.83□□□□□ -0.04
CBX4-204ENST00000495122 INHBBP09529 407 aa14.83□□□□□ -0.04
CBX4-204ENST00000495122 PRKAR1AP10644 381 aa14.83□□□□□ -0.04
CBX4-204ENST00000495122 ZNF3P17036 446 aa14.83□□□□□ -0.04
CBX4-204ENST00000495122 HK1P19367 917 aa14.83□□□□□ -0.04
CBX4-204ENST00000495122 F8A1P23610 371 aa14.83□□□□□ -0.04
CBX4-204ENST00000495122 FXYD6P3P58550 94 aa14.83□□□□□ -0.04
CBX4-204ENST00000495122 PRPS1P60891 318 aa14.83□□□□□ -0.04
CBX4-204ENST00000495122 C6orf15Q6UXA7 325 aaPredicted RBP14.83□□□□□ -0.04
CBX4-204ENST00000495122 HSDL2Q6YN16 418 aa14.83□□□□□ -0.04
CBX4-204ENST00000495122 ATG4DQ86TL0 474 aaPredicted RBP14.83□□□□□ -0.04
CBX4-204ENST00000495122 ZNF321PQ8N8H1 164 aa14.83□□□□□ -0.04
CBX4-204ENST00000495122 GALNT6Q8NCL4 622 aa14.83□□□□□ -0.04
CBX4-204ENST00000495122 OR52N1Q8NH53 320 aa14.83□□□□□ -0.04
CBX4-204ENST00000495122 PHOSPHO1Q8TCT1 267 aa14.83□□□□□ -0.04
CBX4-204ENST00000495122 OPALINQ96PE5 141 aa14.83□□□□□ -0.04
CBX4-204ENST00000495122 GAL3ST4Q96RP7 486 aa14.83□□□□□ -0.04
CBX4-204ENST00000495122 GPX7Q96SL4 187 aaPredicted RBP14.83□□□□□ -0.04
CBX4-204ENST00000495122 IFT27Q9BW83 186 aa14.83□□□□□ -0.04
CBX4-204ENST00000495122 WDR12Q9GZL7 423 aaKnown RBP14.83□□□□□ -0.04
CBX4-204ENST00000495122 HMG20AQ9NP66 347 aa14.83□□□□□ -0.04
CBX4-204ENST00000495122 ATP13A2Q9NQ11 1180 aa14.83□□□□□ -0.04
CBX4-204ENST00000495122 NDUFB11Q9NX14 153 aa14.83□□□□□ -0.04
CBX4-204ENST00000495122 MRPS18BQ9Y676 258 aaKnown RBP14.83□□□□□ -0.04
CBX4-204ENST00000495122 SPENQ96T58 3664 aaKnown RBP14.82□□□□□ -0.04
CBX4-204ENST00000495122 ELOA3DA6NLF2 546 aaPredicted RBP14.82□□□□□ -0.04
CBX4-204ENST00000495122 IDSB3KWA1 339 aa14.82□□□□□ -0.04
CBX4-204ENST00000495122 PRR23D1E9PI22 279 aaPredicted RBP14.82□□□□□ -0.04
CBX4-204ENST00000495122 ADAM11O75078 769 aa14.82□□□□□ -0.04
CBX4-204ENST00000495122 OR7A10O76100 309 aa14.82□□□□□ -0.04
CBX4-204ENST00000495122 TIAF1O95411 115 aa14.82□□□□□ -0.04
CBX4-204ENST00000495122 CD63P08962 238 aa14.82□□□□□ -0.04
CBX4-204ENST00000495122 PRR23D2P0DMB1 279 aaPredicted RBP14.82□□□□□ -0.04
CBX4-204ENST00000495122 APEHP13798 732 aaKnown RBP14.82□□□□□ -0.04
CBX4-204ENST00000495122 PGCP20142 388 aa14.82□□□□□ -0.04
CBX4-204ENST00000495122 GADD45AP24522 165 aa14.82□□□□□ -0.04
CBX4-204ENST00000495122 PSMA1P25786 263 aaKnown RBP14.82□□□□□ -0.04
CBX4-204ENST00000495122 DLSTP36957 453 aa14.82□□□□□ -0.04
CBX4-204ENST00000495122 SLC1A3P43003 542 aa14.82□□□□□ -0.04
CBX4-204ENST00000495122 NR0B1P51843 470 aaKnown RBP14.82□□□□□ -0.04
CBX4-204ENST00000495122 VBP1P61758 197 aa14.82□□□□□ -0.04
CBX4-204ENST00000495122 BDH1Q02338 343 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms