RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 CIB4A0PJX0 185 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 SLC22A31A6NKX4 558 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 H3BML4 177 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 SOX1O00570 391 aaPredicted RBP12.4□□□□□ -0.42
GPC1-209ENST00000495100 TP53P04637 393 aaPredicted RBP12.4□□□□□ -0.42
GPC1-209ENST00000495100 SBK2P0C263 348 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 HNRNPA2B1P22626 353 aaKnown RBP12.4□□□□□ -0.42
GPC1-209ENST00000495100 HTR1FP30939 366 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 CCKBRP32239 447 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 EVX1P49640 407 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 CDK10Q15131 360 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 LRFN4Q6PJG9 635 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 CBLN3Q6UW01 205 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 RCBTB1Q8NDN9 531 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 NUDT22Q9BRQ3 303 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 KIR3DX1Q9H7L2 352 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 MRPS33Q9Y291 106 aaKnown RBP12.4□□□□□ -0.42
GPC1-209ENST00000495100 GBF1Q92538 1859 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 A0A0B4J293 547 aa12.4□□□□□ -0.43
GPC1-209ENST00000495100 IRGMA1A4Y4 181 aa12.4□□□□□ -0.43
GPC1-209ENST00000495100 ADRB1P08588 477 aa12.4□□□□□ -0.43
GPC1-209ENST00000495100 ZGLP1P0C6A0 271 aa12.4□□□□□ -0.43
GPC1-209ENST00000495100 CXCL3P19876 107 aa12.4□□□□□ -0.43
GPC1-209ENST00000495100 DNASE1P24855 282 aa12.4□□□□□ -0.43
GPC1-209ENST00000495100 FPR3P25089 353 aa12.4□□□□□ -0.43
GPC1-209ENST00000495100 STOMP27105 288 aa12.4□□□□□ -0.43
GPC1-209ENST00000495100 CTHP32929 405 aa12.4□□□□□ -0.43
GPC1-209ENST00000495100 MLLT3P42568 568 aaPredicted RBP12.4□□□□□ -0.43
GPC1-209ENST00000495100 VEGFCP49767 419 aa12.4□□□□□ -0.43
GPC1-209ENST00000495100 NR0B1P51843 470 aaKnown RBP12.4□□□□□ -0.43
GPC1-209ENST00000495100 HTRA4P83105 476 aaPredicted RBP12.4□□□□□ -0.43
GPC1-209ENST00000495100 CDC20Q12834 499 aa12.4□□□□□ -0.43
GPC1-209ENST00000495100 NKPD1Q17RQ9 610 aa12.4□□□□□ -0.43
GPC1-209ENST00000495100 ARHGAP40Q5TG30 622 aa12.4□□□□□ -0.43
GPC1-209ENST00000495100 NIPAL3Q6P499 406 aa12.4□□□□□ -0.43
GPC1-209ENST00000495100 TMEM91Q6ZNR0 172 aa12.4□□□□□ -0.43
GPC1-209ENST00000495100 GDPGP1Q6ZNW5 385 aa12.4□□□□□ -0.43
GPC1-209ENST00000495100 NATD1Q8N6N6 113 aa12.4□□□□□ -0.43
GPC1-209ENST00000495100 CDRT4Q8N9R6 151 aa12.4□□□□□ -0.43
GPC1-209ENST00000495100 SYT4Q9H2B2 425 aa12.4□□□□□ -0.43
GPC1-209ENST00000495100 METTL17Q9H7H0 456 aaPredicted RBP12.4□□□□□ -0.43
GPC1-209ENST00000495100 NFKBIL1Q9UBC1 381 aaPredicted RBP12.4□□□□□ -0.43
GPC1-209ENST00000495100 MSRAQ9UJ68 235 aa12.4□□□□□ -0.43
GPC1-209ENST00000495100 HEBP2Q9Y5Z4 205 aa12.4□□□□□ -0.43
GPC1-209ENST00000495100 THSD7BQ9C0I4 1608 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 A0A0A6YYJ9 748 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 EPOPA6NHQ4 379 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 NDUFS1P28331 727 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 ARRB1P49407 418 aaPredicted RBP12.39□□□□□ -0.43
GPC1-209ENST00000495100 FAPQ12884 760 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 EFR3AQ14156 821 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 GRM7Q14831 915 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 OR10K2Q6IF99 312 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 NR2C2APQ86WQ0 139 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 GJD3Q8N144 294 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 FTMTQ8N4E7 242 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 GPR119Q8TDV5 335 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 ZNF775Q96BV0 537 aaPredicted RBP12.39□□□□□ -0.43
GPC1-209ENST00000495100 SGTBQ96EQ0 304 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 BMFQ96LC9 184 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 C5orf34Q96MH7 638 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 ELL3Q9HB65 397 aaPredicted RBP12.39□□□□□ -0.43
GPC1-209ENST00000495100 MEPEQ9NQ76 525 aaPredicted RBP12.39□□□□□ -0.43
GPC1-209ENST00000495100 LAMP5Q9UJQ1 280 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 CACNG2Q9Y698 323 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 HEATR5AQ86XA9 2040 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 XKRYO14609 159 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 ADAM11O75078 769 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 NPR2P20594 1047 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 ZIC1Q15915 447 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 TMEM69Q5SWH9 247 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 FAM69BQ5VUD6 431 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 C1QL3Q5VWW1 255 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 LRRN1Q6UXK5 716 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 COQ8AQ8NI60 647 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 SERINC2Q96SA4 455 aa12.39□□□□□ -0.43
GPC1-209ENST00000495100 CPED1A4D0V7 1026 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 C17orf105B2RV13 164 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 ZNF24P17028 368 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 LGALS3BPQ08380 585 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 GAB4Q2WGN9 574 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 C4orf46Q504U0 113 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 VWA2Q5GFL6 755 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 BICRALQ6AI39 1079 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 MCATQ8IVS2 390 aaKnown RBP12.38□□□□□ -0.43
GPC1-209ENST00000495100 GID4Q8IVV7 300 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 SLC35F2Q8IXU6 374 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 GIMAP1Q8WWP7 306 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 SLITRK2Q9H156 845 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 TAS2R10Q9NYW0 307 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 GRHPRQ9UBQ7 328 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 CD207Q9UJ71 328 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 ALDOBP05062 364 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 NID1P14543 1247 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 ATF1P18846 271 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 TPBGQ13641 420 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 MELKQ14680 651 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 NFATC4Q14934 902 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 MEP1BQ16820 701 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 AADACL4Q5VUY2 407 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms