RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	C10orf53	Q8N6V4	93 aa		12.21	□□□□□ -0.45
APTX-231	ENST00000494973	CLDN22	Q8N7P3	220 aa		12.21	□□□□□ -0.45
APTX-231	ENST00000494973	EXD3	Q8N9H8	876 aa		12.21	□□□□□ -0.45
APTX-231	ENST00000494973	MIB2	Q96AX9	1013 aa		12.21	□□□□□ -0.45
APTX-231	ENST00000494973	GPR137	Q96N19	417 aa		12.21	□□□□□ -0.45
APTX-231	ENST00000494973	OR5B2	Q96R09	309 aa		12.21	□□□□□ -0.45
APTX-231	ENST00000494973	TAAR6	Q96RI8	345 aa		12.21	□□□□□ -0.45
APTX-231	ENST00000494973	FEV	Q99581	238 aa		12.21	□□□□□ -0.45
APTX-231	ENST00000494973	TEX12	Q9BXU0	123 aa		12.21	□□□□□ -0.45
APTX-231	ENST00000494973	DEFB127	Q9H1M4	99 aa		12.21	□□□□□ -0.45
APTX-231	ENST00000494973	NANS	Q9NR45	359 aa		12.21	□□□□□ -0.45
APTX-231	ENST00000494973	PAPOLB	Q9NRJ5	636 aa	Known RBP	12.21	□□□□□ -0.45
APTX-231	ENST00000494973	KRT84	Q9NSB2	600 aa		12.21	□□□□□ -0.45
APTX-231	ENST00000494973	NKX1-2	Q9UD57	310 aa	Predicted RBP	12.21	□□□□□ -0.45
APTX-231	ENST00000494973	ZNF337	Q9Y3M9	751 aa		12.21	□□□□□ -0.45
APTX-231	ENST00000494973	PCNX3	Q9H6A9	2034 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	SHISA8	B8ZZ34	492 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	NPIPA5	E9PKD4	350 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	EI24	O14681	340 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	BCKDK	O14874	412 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	FZD7	O75084	574 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	RCBTB2	O95199	551 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	CPN1	P15169	458 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	ZNF708	P17019	499 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	SFTPD	P35247	375 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	VHL	P40337	213 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	GSS	P48637	474 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	PTDSS1	P48651	473 aa	Known RBP	12.2	□□□□□ -0.46
APTX-231	ENST00000494973	PRPS1	P60891	318 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	PPP2R2B	Q00005	443 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	EGR4	Q05215	589 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	FOXD4	Q12950	439 aa	Predicted RBP	12.2	□□□□□ -0.46
APTX-231	ENST00000494973	TMEM176B	Q3YBM2	270 aa	Predicted RBP	12.2	□□□□□ -0.46
APTX-231	ENST00000494973	RNFT1	Q5M7Z0	435 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	VASN	Q6EMK4	673 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	PPP4R4	Q6NUP7	873 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	TMPPE	Q6ZT21	453 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	NANOGNB	Q7Z5D8	188 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	EPHX4	Q8IUS5	362 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973		Q8NA96	180 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	ADPRHL1	Q8NDY3	354 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	ATP6V1C2	Q8NEY4	427 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	OR9Q2	Q8NGE9	314 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	OR5M1	Q8NGP8	315 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	OR2V1	Q8NHB1	315 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	PFN4	Q8NHR9	129 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	FAR1	Q8WVX9	515 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	SMPDL3B	Q92485	455 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	CPNE4	Q96A23	557 aa	Predicted RBP	12.2	□□□□□ -0.46
APTX-231	ENST00000494973	ZNF524	Q96C55	264 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	FAM46A	Q96IP4	442 aa	Known RBP	12.2	□□□□□ -0.46
APTX-231	ENST00000494973	NAA11	Q9BSU3	229 aa	Predicted RBP	12.2	□□□□□ -0.46
APTX-231	ENST00000494973	UCK2	Q9BZX2	261 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	MEPE	Q9NQ76	525 aa	Predicted RBP	12.2	□□□□□ -0.46
APTX-231	ENST00000494973	NPIPA1	Q9UND3	350 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	SPTA1	P02549	2419 aa		12.2	□□□□□ -0.46
APTX-231	ENST00000494973	UNC119B	A6NIH7	251 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	LIPT2	A6NK58	231 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	SULT2B1	O00204	365 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	SEC14L5	O43304	696 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	KLF4	O43474	513 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	OR6A2	O95222	327 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	ALPL	P05186	524 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	CELA3A	P09093	270 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	FCGR2A	P12318	317 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	BMP7	P18075	431 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	PTGER4	P35408	488 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	RPS5	P46782	204 aa	Known RBP	12.19	□□□□□ -0.46
APTX-231	ENST00000494973	RAC3	P60763	192 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	ESRRG	P62508	458 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	RBPJ	Q06330	500 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	PPP1R8	Q12972	351 aa	Known RBP	12.19	□□□□□ -0.46
APTX-231	ENST00000494973	MYBPH	Q13203	477 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	WLS	Q5T9L3	541 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	KDM4D	Q6B0I6	523 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	HBM	Q6B0K9	141 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	TBPL2	Q6SJ96	375 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	RASSF6	Q6ZTQ3	369 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	ZER1	Q7Z7L7	766 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	TMEM179B	Q7Z7N9	219 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	OAF	Q86UD1	273 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	OR52L1	Q8NGH7	329 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	MAGEE2	Q8TD90	523 aa	Predicted RBP	12.19	□□□□□ -0.46
APTX-231	ENST00000494973	KTI12	Q96EK9	354 aa	Predicted RBP	12.19	□□□□□ -0.46
APTX-231	ENST00000494973	PRRG3	Q9BZD7	231 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	OR11A1	Q9GZK7	315 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	TMEM185B	Q9H7F4	350 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	SMPD3	Q9NY59	655 aa	Predicted RBP	12.19	□□□□□ -0.46
APTX-231	ENST00000494973	MRPL39	Q9NYK5	338 aa	Known RBP	12.19	□□□□□ -0.46
APTX-231	ENST00000494973	B3GALT5	Q9Y2C3	310 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	SLC6A5	Q9Y345	797 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	CFAP47	Q6ZTR5	3102 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	ZFHX4	Q86UP3	3567 aa		12.19	□□□□□ -0.46
APTX-231	ENST00000494973	TLN1	Q9Y490	2541 aa	Known RBP	12.18	□□□□□ -0.46
APTX-231	ENST00000494973	MGA	Q8IWI9	3026 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	NCKAP5	O14513	1909 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	ZC3H12D	A2A288	527 aa	Known RBP	12.18	□□□□□ -0.46
APTX-231	ENST00000494973	PDLIM1	O00151	329 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	EIF1AY	O14602	144 aa	Known RBP	12.18	□□□□□ -0.46
APTX-231	ENST00000494973	ATXN7	O15265	892 aa	Predicted RBP	12.18	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms