RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 PYCR1P32322 319 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 RPL4P36578 427 aaKnown RBP9.48□□□□□ -0.89
SAMM50-206ENST00000494795 CDKN2AP42771 156 aaKnown RBP9.48□□□□□ -0.89
SAMM50-206ENST00000494795 OR10A3P58181 314 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 SLC3A1Q07837 685 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.48□□□□□ -0.89
SAMM50-206ENST00000494795 WDR45BQ5MNZ6 344 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 RNLSQ5VYX0 342 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 ARL9Q6T311 187 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 QSOX2Q6ZRP7 698 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 CDK20Q8IZL9 346 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 C10orf53Q8N6V4 93 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 OR4C6Q8NH72 309 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 SAP25Q8TEE9 199 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 LCORQ96JN0 433 aaPredicted RBP9.48□□□□□ -0.89
SAMM50-206ENST00000494795 NEURL2Q9BR09 285 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 TRIM2Q9C040 744 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 GALNT9Q9HCQ5 603 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 POLE3Q9NRF9 147 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 ING1Q9UK53 422 aaPredicted RBP9.48□□□□□ -0.89
SAMM50-206ENST00000494795 PCDHGB6Q9Y5F9 930 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 MN1Q10571 1320 aaPredicted RBP9.48□□□□□ -0.89
SAMM50-206ENST00000494795 A0A1B0GX78 115 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 RCBTB2O95199 551 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 HNRNPCP07910 306 aaKnown RBP eCLIP9.48□□□□□ -0.89
SAMM50-206ENST00000494795 UBL4AP11441 157 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 PSKH1P11801 424 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 ZNF12P17014 697 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 IL11P20809 199 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 ABCD3P28288 659 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 TACR3P29371 465 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 PPICP45877 212 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 TCEAL6Q6IPX3 200 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 MARCH9Q86YJ5 346 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 WDFY1Q8IWB7 410 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 KDM8Q8N371 416 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 ZNF511Q8NB15 262 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 ATP6V1C2Q8NEY4 427 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 S100ZQ8WXG8 99 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 SMPDL3BQ92485 455 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 UFD1Q92890 307 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 TCEAL3Q969E4 200 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 SLC25A46Q96AG3 418 aa9.48□□□□□ -0.89
SAMM50-206ENST00000494795 TEX13CA0A0J9YWL9 993 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 IGHV5-10-1A0A0J9YXX1 117 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 DAPL1A0PJW8 107 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 GTPBP1O00178 669 aaKnown RBP9.47□□□□□ -0.89
SAMM50-206ENST00000494795 ADAM10O14672 748 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 HCN1O60741 890 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 IL33O95760 270 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 HMGN1P05114 100 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 SBK2P0C263 348 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 PEPDP12955 493 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 ITPKBP27987 946 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 PSMB10P40306 273 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 SERTAD2Q14140 314 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 TAB1Q15750 504 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 ATG4DQ86TL0 474 aaPredicted RBP9.47□□□□□ -0.89
SAMM50-206ENST00000494795 ACBD7Q8N6N7 88 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 POC5Q8NA72 575 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 RFKQ969G6 155 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 TAAR8Q969N4 342 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 SGTBQ96EQ0 304 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 NEDD4LQ96PU5 975 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 OR11A1Q9GZK7 315 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 WWTR1Q9GZV5 400 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 GAREM1Q9H706 876 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 UBQLN4Q9NRR5 601 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 COMMD3Q9UBI1 195 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 SERTAD3Q9UJW9 196 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 CFL2Q9Y281 166 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 B3GNT3Q9Y2A9 372 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 EXOSC1Q9Y3B2 195 aaKnown RBP9.47□□□□□ -0.89
SAMM50-206ENST00000494795 A0A0B4J203 849 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 A0A1B0GTH9 108 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 NUDT14O95848 222 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 PLGP00747 810 aaPredicted RBP9.47□□□□□ -0.89
SAMM50-206ENST00000494795 OPN1LWP04000 364 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 ZNF28P17035 718 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 PAICSP22234 425 aaKnown RBP9.47□□□□□ -0.89
SAMM50-206ENST00000494795 SHC1P29353 583 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 S100A5P33763 92 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 RORAP35398 523 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 BCAP31P51572 246 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 GPR143P51810 404 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 RTL4Q6ZR62 310 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 KLHL36Q8N4N3 616 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 CELF2-AS1Q8N7Q2 184 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 NPEPL1Q8NDH3 523 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 FAM71CQ8NEG0 241 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 OMA1Q96E52 524 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 RNF32Q9H0A6 362 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 PILRBQ9UKJ0 227 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 SLC35A3Q9Y2D2 325 aa9.47□□□□□ -0.89
SAMM50-206ENST00000494795 SCDO00767 359 aa9.46□□□□□ -0.89
SAMM50-206ENST00000494795 POLR1CO15160 346 aaPredicted RBP9.46□□□□□ -0.89
SAMM50-206ENST00000494795 ZNF264O43296 627 aa9.46□□□□□ -0.89
SAMM50-206ENST00000494795 CELA2AP08217 269 aa9.46□□□□□ -0.89
SAMM50-206ENST00000494795 ARRB1P49407 418 aaPredicted RBP9.46□□□□□ -0.89
SAMM50-206ENST00000494795 FBXW4P57775 412 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms