RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 ADGRG4Q8IZF6 3080 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 A0A1B0GWA3 101 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 SH3D21A4FU49 640 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 C16orf97H3BN30 126 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 M0R3H8 397 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 CASKO14936 926 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 DCTN3O75935 186 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 AHSA1O95433 338 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 PNMTP11086 282 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 EPXP11678 715 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 HTR2AP28223 471 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 PRDX6P30041 224 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 OR1Q1Q15612 314 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 C1orf140Q5VVS0 124 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 ULK3Q6PHR2 472 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 CCDC80Q76M96 950 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 PIGWQ7Z7B1 504 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 GALNT5Q7Z7M9 940 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 LSRQ86X29 649 aaPredicted RBP14.18□□□□□ -0.14
LIME1-209ENST00000494776 CCDC103Q8IW40 242 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 VANGL1Q8TAA9 524 aaPredicted RBP14.18□□□□□ -0.14
LIME1-209ENST00000494776 STK35Q8TDR2 534 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 PROX1Q92786 737 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 TAMM41Q96BW9 452 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 SLC47A1Q96FL8 570 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 LRRC37BQ96QE4 947 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 ZNF300Q96RE9 604 aaPredicted RBP14.18□□□□□ -0.14
LIME1-209ENST00000494776 MCHR1Q99705 422 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 ARHGDIGQ99819 225 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 C12orf10Q9HB07 376 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 ADPRHL2Q9NX46 363 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 USP22Q9UPT9 525 aa14.18□□□□□ -0.14
LIME1-209ENST00000494776 CELSR2Q9HCU4 2923 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 ELOVL7A1L3X0 281 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 LIPT2A6NK58 231 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 ZNF724A8MTY0 619 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 GPR171O14626 319 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 GSTA4O15217 222 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 GTF2E2P29084 291 aaKnown RBP14.17□□□□□ -0.14
LIME1-209ENST00000494776 UGT2B10P36537 528 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 PCYT1AP49585 367 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 LIPEQ05469 1076 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 PDK3Q15120 406 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 LRRC23Q53EV4 343 aaPredicted RBP14.17□□□□□ -0.14
LIME1-209ENST00000494776 OTUD3Q5T2D3 398 aaPredicted RBP14.17□□□□□ -0.14
LIME1-209ENST00000494776 FAM91A1Q658Y4 838 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 ABLIM2Q6H8Q1 611 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 PAQR6Q6TCH4 344 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 HACD2Q6Y1H2 254 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 LURAP1LQ8IV03 231 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 SLC15A3Q8IY34 581 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 ZNF100Q8IYN0 542 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 MICU2Q8IYU8 434 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 GPR32P1Q8NGA4 272 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 SLC25A36Q96CQ1 311 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 DACH2Q96NX9 599 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 WFDC6Q9BQY6 131 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 GPATCH1Q9BRR8 931 aaKnown RBP14.17□□□□□ -0.14
LIME1-209ENST00000494776 MED18Q9BUE0 208 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 CMTM6Q9NX76 183 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 BAG5Q9UL15 447 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 SLC9A8Q9Y2E8 581 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 NOSIPQ9Y314 301 aaKnown RBP14.17□□□□□ -0.14
LIME1-209ENST00000494776 PKDREJQ9NTG1 2253 aa14.17□□□□□ -0.14
LIME1-209ENST00000494776 TMEM229AB2RXF0 380 aa14.16□□□□□ -0.14
LIME1-209ENST00000494776 NDUFAB1O14561 156 aa14.16□□□□□ -0.14
LIME1-209ENST00000494776 AKR7A3O95154 331 aa14.16□□□□□ -0.14
LIME1-209ENST00000494776 CD247P20963 164 aa14.16□□□□□ -0.14
LIME1-209ENST00000494776 RPS5P46782 204 aaKnown RBP14.16□□□□□ -0.14
LIME1-209ENST00000494776 SLC7A2P52569 658 aa14.16□□□□□ -0.14
LIME1-209ENST00000494776 NRF1Q16656 503 aa14.16□□□□□ -0.14
LIME1-209ENST00000494776 ANKRD34AQ69YU3 496 aa14.16□□□□□ -0.14
LIME1-209ENST00000494776 TMEM225Q6GV28 225 aa14.16□□□□□ -0.14
LIME1-209ENST00000494776 C6orf89Q6UWU4 347 aa14.16□□□□□ -0.14
LIME1-209ENST00000494776 TFAP2EQ6VUC0 442 aa14.16□□□□□ -0.14
LIME1-209ENST00000494776 OR6T1Q8NGN1 323 aa14.16□□□□□ -0.14
LIME1-209ENST00000494776 SLC38A4Q969I6 547 aa14.16□□□□□ -0.14
LIME1-209ENST00000494776 CCT8L2Q96SF2 557 aa14.16□□□□□ -0.14
LIME1-209ENST00000494776 C6orf203Q9P0P8 240 aaPredicted RBP14.16□□□□□ -0.14
LIME1-209ENST00000494776 ING1Q9UK53 422 aaPredicted RBP14.16□□□□□ -0.14
LIME1-209ENST00000494776 IGKV3D-15A0A087WSY6 115 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 A0A0B4J2E0 115 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 A0A1B0GX12 115 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 CPSF4LA6NMK7 179 aaKnown RBP14.15□□□□□ -0.14
LIME1-209ENST00000494776 A6NNC1 897 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 ZNF716A6NP11 495 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 ZNF814B7Z6K7 855 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 TPST2O60704 377 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 FMO6PO60774 539 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 KDELR2P33947 212 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 CDH12P55289 794 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 PSME3P61289 254 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 H3F3AP84243 136 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 ENTPD8Q5MY95 495 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 GKAP1Q5VSY0 366 aaPredicted RBP14.15□□□□□ -0.14
LIME1-209ENST00000494776 ZNF613Q6PF04 617 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 C5orf46Q6UWT4 87 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 GPAT4Q86UL3 456 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 UBE2J2Q8N2K1 259 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 TMEM99Q8N816 258 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms