RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	PARP8	Q8N3A8	854 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	PRSS35	Q8N3Z0	413 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	EMC1	Q8N766	993 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	OR5T3	Q8NGG3	340 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	OR52B4	Q8NGK2	314 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	OR4K15	Q8NH41	348 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	OR51A7	Q8NH64	312 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	HM13	Q8TCT9	377 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	DYNC2LI1	Q8TCX1	351 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	SLC38A4	Q969I6	547 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	ULK4	Q96C45	1275 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	ZNF501	Q96CX3	271 aa	Predicted RBP	4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	SMIM12	Q96EX1	92 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	SAT2	Q96F10	170 aa	Predicted RBP	4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	DTD2	Q96FN9	168 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	SLC45A3	Q96JT2	553 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	GLT1D1	Q96MS3	346 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	SLC38A2	Q96QD8	506 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	RNF2	Q99496	336 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	PRMT1	Q99873	361 aa	Known RBP	4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	GGACT	Q9BVM4	153 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	C1QTNF5	Q9BXJ0	243 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	SRR	Q9GZT4	340 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	NEUROG2	Q9H2A3	272 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	MEAF6	Q9HAF1	191 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	EQTN	Q9NQ60	294 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	SIRT7	Q9NRC8	400 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	SPHK1	Q9NYA1	384 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	SPG21	Q9NZD8	308 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	ADA2	Q9NZK5	511 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	BFAR	Q9NZS9	450 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	ONECUT1	Q9UBC0	465 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	ZNF282	Q9UDV7	671 aa	Predicted RBP	4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	ZNF221	Q9UK13	617 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	IKZF3	Q9UKT9	509 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	RASD1	Q9Y272	281 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	MRPS18C	Q9Y3D5	142 aa	Known RBP	4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	LSM4	Q9Y4Z0	139 aa	Known RBP	4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	KLK4	Q9Y5K2	254 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	MMP24	Q9Y5R2	645 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	URGCP-MRPS24	S4R325	110 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	AQR	O60306	1485 aa	Known RBP eCLIP	4.16	□□□□□ -1.74	1e-19	■■■■■ 74.1
CCDC66-222	ENST00000494672	ZNF532	Q9HCE3	1301 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672		A0A1W2PP64	1363 aa		4.15	□□□□□ -1.74
CCDC66-222	ENST00000494672	PTPRT	O14522	1441 aa		4.15	□□□□□ -1.74
CCDC66-222	ENST00000494672	TMEM131L	A2VDJ0	1609 aa		4.15	□□□□□ -1.74
CCDC66-222	ENST00000494672	ISPD	A4D126	451 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672		A8MUA0	341 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	CDRT15L2	A8MXV6	281 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	TRDC	B7Z8K6	153 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	TMX2-CTNND1	H3BSU7	103 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672		I3L521	148 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672		M0R296	226 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	SULT1C2	O00338	296 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	BHLHE40	O14503	412 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	RAMP3	O60896	148 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	EIF3G	O75821	320 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	SUPT7L	O94864	414 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	OR2C1	O95371	312 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	H6PD	O95479	791 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	NDUFB10	O96000	172 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	SERPINA1	P01009	418 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	IFNA21	P01568	189 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	CHRNG	P07510	517 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	APRT	P07741	180 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	ALPI	P09923	528 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	UBC	P0CG48	685 aa	Known RBP	4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	SCGB1A1	P11684	91 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	ZNF23	P17027	643 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	ZP3	P21754	424 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	BGN	P21810	368 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	FOXN2	P32314	431 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	CEACAM3	P40198	252 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	SERPINB10	P48595	397 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	TAF6	P49848	677 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	METAP2	P50579	478 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	RAB28	P51157	221 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	PLA2G16	P53816	162 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	HERVK_113	P63132	956 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	CCL7	P80098	99 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	TFAM	Q00059	246 aa	Known RBP	4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	CSTF1	Q05048	431 aa	Known RBP	4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	SLC34A1	Q06495	639 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	ILK	Q13418	452 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	TDG	Q13569	410 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	SERTAD2	Q14140	314 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	IL11RA	Q14626	422 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	P2RY14	Q15391	338 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	TAF1A	Q15573	450 aa	Predicted RBP	4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	TMEM249	Q2WGJ8	235 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	TMEM30B	Q3MIR4	351 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	COX19	Q49B96	90 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	RSBN1	Q5VWQ0	802 aa	Predicted RBP	4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	TRIQK	Q629K1	86 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	ADNP2	Q6IQ32	1131 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	NANOGP8	Q6NSW7	305 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	REEP3	Q6NUK4	255 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	ACSM5	Q6NUN0	579 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	MED27	Q6P2C8	311 aa		4.15	□□□□□ -1.75
CCDC66-222	ENST00000494672	LINC00299	Q6ZSB3	139 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms