RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 FOXF2Q12947 444 aa11.15□□□□□ -0.62
TRA2A-209ENST00000494255 FXNQ16595 210 aa11.15□□□□□ -0.62
TRA2A-209ENST00000494255 LIX1LQ8IVB5 337 aa11.15□□□□□ -0.62
TRA2A-209ENST00000494255 RNF128Q8TEB7 428 aa11.15□□□□□ -0.62
TRA2A-209ENST00000494255 LRRC46Q96FV0 321 aa11.15□□□□□ -0.62
TRA2A-209ENST00000494255 NSMCE2Q96MF7 247 aa11.15□□□□□ -0.62
TRA2A-209ENST00000494255 EPYCQ99645 322 aa11.15□□□□□ -0.62
TRA2A-209ENST00000494255 NAA11Q9BSU3 229 aaPredicted RBP11.15□□□□□ -0.62
TRA2A-209ENST00000494255 MUC13Q9H3R2 512 aa11.15□□□□□ -0.62
TRA2A-209ENST00000494255 DCAF13Q9NV06 445 aaKnown RBP11.15□□□□□ -0.62
TRA2A-209ENST00000494255 KLHL9Q9P2J3 617 aa11.15□□□□□ -0.62
TRA2A-209ENST00000494255 SLC7A7Q9UM01 511 aa11.15□□□□□ -0.62
TRA2A-209ENST00000494255 MPDZO75970 2070 aa11.15□□□□□ -0.63
TRA2A-209ENST00000494255 A0A087WUJ7 227 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 IGHV3-15A0A0B4J1V0 119 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 LIPT2A6NK58 231 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 EEF1E1-BLOC1S5C9J1V9 151 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 PRSS44E7EML9 344 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 SMAD9O15198 467 aaKnown RBP11.14□□□□□ -0.63
TRA2A-209ENST00000494255 EEF1E1O43324 174 aaKnown RBP11.14□□□□□ -0.63
TRA2A-209ENST00000494255 PRKD3O94806 890 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 STAMBPO95630 424 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 CLDN1O95832 211 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 IMPDH2P12268 514 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 FPR1P21462 350 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 GTF2E2P29084 291 aaKnown RBP11.14□□□□□ -0.63
TRA2A-209ENST00000494255 RASSF2P50749 326 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 SIRPAP78324 504 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 RASGEF1BQ0VAM2 473 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 BNIP1Q12981 228 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 CDSNQ15517 529 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 OR7A5Q15622 319 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 PIGXQ8TBF5 258 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 ABHD3Q8WU67 409 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 SLC41A3Q96GZ6 507 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 MPP4Q96JB8 637 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 TACO1Q9BSH4 297 aaKnown RBP11.14□□□□□ -0.63
TRA2A-209ENST00000494255 THTPAQ9BU02 230 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 UCK2Q9BZX2 261 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 PIGMQ9H3S5 423 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 CLEC4AQ9UMR7 237 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 TRAV36DV7A0A075B6V5 113 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 NKX2-6A6NCS4 301 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 OR2T1O43869 369 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 NPIPB7O75200 414 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 SMNDC1O75940 238 aaKnown RBP eCLIP11.14□□□□□ -0.635e-9■□□□□ 8.5
TRA2A-209ENST00000494255 ATP5HO75947 161 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 PDE5AO76074 875 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 OR5F1O95221 314 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 RPS5P46782 204 aaKnown RBP11.14□□□□□ -0.63
TRA2A-209ENST00000494255 ASCL1P50553 236 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 TMEM201Q5SNT2 666 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 TTC33Q6PID6 262 aaPredicted RBP11.14□□□□□ -0.63
TRA2A-209ENST00000494255 FAM214BQ7L5A3 538 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 CYP4Z1Q86W10 505 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 RELL2Q8NC24 303 aaPredicted RBP11.14□□□□□ -0.63
TRA2A-209ENST00000494255 MFSD8Q8NHS3 518 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 KTI12Q96EK9 354 aaPredicted RBP11.14□□□□□ -0.63
TRA2A-209ENST00000494255 BTBD10Q9BSF8 475 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 TMEM43Q9BTV4 400 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 GP6Q9HCN6 339 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 CHST11Q9NPF2 352 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 C6orf203Q9P0P8 240 aaPredicted RBP11.14□□□□□ -0.63
TRA2A-209ENST00000494255 ACTR3BQ9P1U1 418 aa11.14□□□□□ -0.63
TRA2A-209ENST00000494255 PLEKHB1Q9UF11 243 aaPredicted RBP11.14□□□□□ -0.63
TRA2A-209ENST00000494255 FLNCQ14315 2725 aa11.13□□□□□ -0.63
TRA2A-209ENST00000494255 INTS1Q8N201 2190 aaKnown RBP11.13□□□□□ -0.63
TRA2A-209ENST00000494255 DOPEY2Q9Y3R5 2298 aa11.13□□□□□ -0.63
TRA2A-209ENST00000494255 CYTIPO60759 359 aa11.13□□□□□ -0.63
TRA2A-209ENST00000494255 SS18L1O75177 396 aaPredicted RBP11.13□□□□□ -0.63
TRA2A-209ENST00000494255 TNFSF13O75888 250 aa11.13□□□□□ -0.63
TRA2A-209ENST00000494255 THRBP10828 461 aa11.13□□□□□ -0.63
TRA2A-209ENST00000494255 KIR2DL2P43627 348 aaPredicted RBP11.13□□□□□ -0.63
TRA2A-209ENST00000494255 CBX1P83916 185 aa11.13□□□□□ -0.63
TRA2A-209ENST00000494255 EGR4Q05215 589 aa11.13□□□□□ -0.63
TRA2A-209ENST00000494255 TRIM25Q14258 630 aaKnown RBP11.13□□□□□ -0.63
TRA2A-209ENST00000494255 MFSD13AQ14CX5 517 aa11.13□□□□□ -0.63
TRA2A-209ENST00000494255 OTUD3Q5T2D3 398 aaPredicted RBP11.13□□□□□ -0.63
TRA2A-209ENST00000494255 FAM69AQ5T7M9 428 aa11.13□□□□□ -0.63
TRA2A-209ENST00000494255 ABLIM2Q6H8Q1 611 aa11.13□□□□□ -0.63
TRA2A-209ENST00000494255 PAQR6Q6TCH4 344 aa11.13□□□□□ -0.63
TRA2A-209ENST00000494255 GDF7Q7Z4P5 450 aa11.13□□□□□ -0.63
TRA2A-209ENST00000494255 OR6K3Q8NGY3 331 aa11.13□□□□□ -0.63
TRA2A-209ENST00000494255 SLC25A36Q96CQ1 311 aa11.13□□□□□ -0.63
TRA2A-209ENST00000494255 PRRC1Q96M27 445 aa11.13□□□□□ -0.63
TRA2A-209ENST00000494255 FNDC11Q9BVV2 318 aa11.13□□□□□ -0.63
TRA2A-209ENST00000494255 AMBRA1Q9C0C7 1298 aa11.13□□□□□ -0.63
TRA2A-209ENST00000494255 EMC3Q9P0I2 261 aa11.13□□□□□ -0.63
TRA2A-209ENST00000494255 KLHL13Q9P2N7 655 aa11.13□□□□□ -0.63
TRA2A-209ENST00000494255 RIMS3Q9UJD0 308 aa11.13□□□□□ -0.63
TRA2A-209ENST00000494255 FAM32AQ9Y421 112 aaKnown RBP11.13□□□□□ -0.63
TRA2A-209ENST00000494255 V9GYQ6 96 aa11.13□□□□□ -0.63
TRA2A-209ENST00000494255 RELNP78509 3460 aa11.12□□□□□ -0.63
TRA2A-209ENST00000494255 USP9XQ93008 2570 aaPredicted RBP11.12□□□□□ -0.63
TRA2A-209ENST00000494255 IGKV1D-42A0A075B6H8 117 aa11.12□□□□□ -0.63
TRA2A-209ENST00000494255 DNAJC8O75937 253 aaPredicted RBP11.12□□□□□ -0.63
TRA2A-209ENST00000494255 AKR7A3O95154 331 aa11.12□□□□□ -0.63
TRA2A-209ENST00000494255 YES1P07947 543 aa11.12□□□□□ -0.63
TRA2A-209ENST00000494255 PTNP21246 168 aa11.12□□□□□ -0.63
TRA2A-209ENST00000494255 AGTR1P30556 359 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms