RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 LSM11P83369 360 aaKnown RBP eCLIP10.57□□□□□ -0.72
RFC4-214ENST00000494047 HOXC5Q00444 222 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 CRMP1Q14194 572 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.57□□□□□ -0.72
RFC4-214ENST00000494047 BTBD16Q32M84 506 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 PRRT3Q5FWE3 981 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 ZBTB37Q5TC79 503 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 FAAH2Q6GMR7 532 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 ARMC6Q6NXE6 501 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 ENPP7Q6UWV6 458 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 C11orf74Q86VG3 221 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 CCDC28AQ8IWP9 274 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 SLC35F2Q8IXU6 374 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 MAML2Q8IZL2 1156 aaPredicted RBP10.57□□□□□ -0.72
RFC4-214ENST00000494047 CSNK1A1LQ8N752 337 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 Q8N9G6 341 aaPredicted RBP10.57□□□□□ -0.72
RFC4-214ENST00000494047 ZNF671Q8TAW3 534 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 ZCCHC10Q8TBK6 192 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 CNOT9Q92600 299 aaKnown RBP10.57□□□□□ -0.72
RFC4-214ENST00000494047 GHSRQ92847 366 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 SIPA1Q96FS4 1042 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 SENP5Q96HI0 755 aaPredicted RBP10.57□□□□□ -0.72
RFC4-214ENST00000494047 GPR137Q96N19 417 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 ERMAPQ96PL5 475 aaPredicted RBP10.57□□□□□ -0.72
RFC4-214ENST00000494047 OR51V1Q9H2C8 321 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 GHITMQ9H3K2 345 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 ISG20L2Q9H9L3 353 aaKnown RBP10.57□□□□□ -0.72
RFC4-214ENST00000494047 EXOSC3Q9NQT5 275 aaKnown RBP10.57□□□□□ -0.72
RFC4-214ENST00000494047 CHRNA9Q9UGM1 479 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 ST6GALNAC2Q9UJ37 374 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 ICAM5Q9UMF0 924 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 HSPB11Q9Y547 144 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 A0A0G2JK05 382 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 LOC102723532A0A0G2JNH3 316 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 TEX13CA0A0J9YWL9 993 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 A0A1B0GUH1 482 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 FAM183AA6NL82 134 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 H0YGG7 62 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 EEF1E1O43324 174 aaKnown RBP10.56□□□□□ -0.72
RFC4-214ENST00000494047 SLC2A10O95528 541 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 EGFP01133 1207 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 TNFP01375 233 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 EIF4EP06730 217 aaKnown RBP10.56□□□□□ -0.72
RFC4-214ENST00000494047 H2AFB2P0C5Z0 115 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 CFPP27918 469 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 SHC1P29353 583 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 PYCR1P32322 319 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 GABRA3P34903 492 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 HTR2BP41595 481 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 DIO1P49895 249 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 CAV3P56539 151 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 FXYD6P3P58550 94 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 ARF3P61204 181 aaPredicted RBP10.56□□□□□ -0.72
RFC4-214ENST00000494047 IGLV3-21P80748 117 aaPredicted RBP10.56□□□□□ -0.72
RFC4-214ENST00000494047 SIM1P81133 766 aaPredicted RBP10.56□□□□□ -0.72
RFC4-214ENST00000494047 ZNF85Q03923 595 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 SLC3A1Q07837 685 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 RUNX2Q13950 521 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 SERTAD2Q14140 314 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 TOMM20Q15388 145 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 ESCO2Q56NI9 601 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 FCRL6Q6DN72 434 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 UNQ9370/PRO34162Q6UXP9 181 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 KRT74Q7RTS7 529 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 OR6V1Q8N148 313 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 CA13Q8N1Q1 262 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 ZBTB44Q8NCP5 570 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 FAM71CQ8NEG0 241 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 OR13C2Q8NGS9 318 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 PFN4Q8NHR9 129 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 ZNF431Q8TF32 576 aaPredicted RBP10.56□□□□□ -0.72
RFC4-214ENST00000494047 PTP4A1Q93096 173 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 YIPF5Q969M3 257 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 CACNG6Q9BXT2 260 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 MKRN2Q9H000 416 aaKnown RBP10.56□□□□□ -0.72
RFC4-214ENST00000494047 NUDT15Q9NV35 164 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 FAM86C1Q9NVL1 165 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 DNAJB12Q9NXW2 375 aaKnown RBP10.56□□□□□ -0.72
RFC4-214ENST00000494047 KLHL9Q9P2J3 617 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 MALT1Q9UDY8 824 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 SERGEFQ9UGK8 458 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 IL20RAQ9UHF4 553 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 ZNF281Q9Y2X9 895 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 ATG2BQ96BY7 2078 aa10.56□□□□□ -0.72
RFC4-214ENST00000494047 SNRNP200O75643 2136 aaKnown RBP10.55□□□□□ -0.72
RFC4-214ENST00000494047 A0A087WUJ7 227 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 A0A0A6YYJ9 748 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 CCDC163A0A0D9SF12 145 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 TRBV2A0A0J9YWF9 115 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 A0A1B0GW55 424 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 SHISA3A0PJX4 238 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 TTLL8A6PVC2 850 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 A8MV72 311 aaPredicted RBP10.55□□□□□ -0.72
RFC4-214ENST00000494047 ACOT7O00154 380 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 FGF17O60258 216 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 NCR1O76036 304 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 GLCEO94923 617 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 PPP1R3DO95685 299 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 TPOP07202 933 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 DUX4L2P0CJ85 424 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms