RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 CFLARO15519 480 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 VAMP5O95183 116 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 CD1CP29017 333 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 GTF2E2P29084 291 aaKnown RBP10.7□□□□□ -0.7
BRCA1-222ENST00000493919 MAP2K4P45985 399 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 BDKRB1P46663 353 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 RAB5CP51148 216 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 BEX5Q5H9J7 111 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 PLAC9Q5JTB6 97 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 DHRS7BQ6IAN0 325 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-222ENST00000493919 RGS7BPQ6MZT1 257 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-222ENST00000493919 VASH2Q86V25 355 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 FAM89BQ8N5H3 189 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 ACVR1CQ8NER5 493 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 WDR36Q8NI36 951 aaKnown RBP10.7□□□□□ -0.7
BRCA1-222ENST00000493919 HAS2Q92819 552 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 LRRC46Q96FV0 321 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 NRTNQ99748 197 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 SORBS1Q9BX66 1292 aaKnown RBP10.7□□□□□ -0.7
BRCA1-222ENST00000493919 RHOJQ9H4E5 214 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 MANSC1Q9H8J5 431 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 RNF122Q9H9V4 155 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 NMNAT1Q9HAN9 279 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-222ENST00000493919 SLC35F4A4IF30 521 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 AQP12BA6NM10 295 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 C1orf196B1AJZ1 125 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 KHDRBS3O75525 346 aaKnown RBP10.7□□□□□ -0.7
BRCA1-222ENST00000493919 C1QAP02745 245 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 RPN2P04844 631 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 NBEAP1P0C6P0 100 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 S1PR1P21453 382 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 GCGRP47871 477 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 GFERP55789 205 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 GABARAPL2P60520 117 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 POU4F1Q01851 419 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 FASTKQ14296 549 aaKnown RBP10.7□□□□□ -0.7
BRCA1-222ENST00000493919 ZNF460Q14592 562 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 ISXQ2M1V0 245 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 VPS26BQ4G0F5 336 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 CDCP2Q5VXM1 449 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 GHDCQ8N2G8 530 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 CDYL2Q8N8U2 506 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 FAM83FQ8NEG4 500 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-222ENST00000493919 OR5K2Q8NHB8 316 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 LCN9Q8WX39 176 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 TGM7Q96PF1 710 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 SIGLEC11Q96RL6 698 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 NDUFAF3Q9BU61 184 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 SRRQ9GZT4 340 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 SRMSQ9H3Y6 488 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 PRDM13Q9H4Q3 707 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 KRCC1Q9NPI7 259 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-222ENST00000493919 ARMCX1Q9P291 453 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 OPN4Q9UHM6 478 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 OSGIN1Q9UJX0 560 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 DYRK1BQ9Y463 629 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 ELOA3CA0A087WX78 387 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-222ENST00000493919 ELOA3DA6NLF2 546 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-222ENST00000493919 PDCD5O14737 125 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 GGCTO75223 188 aaKnown RBP10.69□□□□□ -0.7
BRCA1-222ENST00000493919 CYP7B1O75881 506 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 RGS9O75916 674 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-222ENST00000493919 FAM155BO75949 473 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 NPR2P20594 1047 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 FDXRP22570 491 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 GABRR1P24046 479 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 MYL9P24844 172 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 GGT5P36269 586 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 TGM4P49221 684 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 RGS4P49798 205 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 PPP1CAP62136 330 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 HAGHQ16775 308 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 ZNF404Q494X3 552 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 RBM48Q5RL73 367 aaKnown RBP10.69□□□□□ -0.7
BRCA1-222ENST00000493919 XAF1Q6GPH4 301 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 PAQR3Q6TCH7 311 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 OOSP2Q86WS3 158 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 DCUN1D3Q8IWE4 304 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 DCBLD1Q8N8Z6 715 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 OR4E2Q8NGC2 313 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 STK35Q8TDR2 534 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 TMEM74Q96NL1 305 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 RBBP8Q99708 897 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 EBF4Q9BQW3 602 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-222ENST00000493919 CENPMQ9NSP4 180 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 ZNF281Q9Y2X9 895 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 ENTPD2Q9Y5L3 495 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 CHD8Q9HCK8 2581 aa10.69□□□□□ -0.7
BRCA1-222ENST00000493919 SYT5O00445 386 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 THBS1P07996 1170 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 PEPDP12955 493 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 ACPPP15309 386 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 TUBG1P23258 451 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 EMP2P54851 167 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 SLC25A3Q00325 362 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 TIAL1Q01085 375 aaKnown RBP eCLIP10.68□□□□□ -0.7
BRCA1-222ENST00000493919 MC1RQ01726 317 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 CFHR1Q03591 330 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 TLE4Q04727 773 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms