RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 SFRP5Q5T4F7 317 aa20.06■□□□□ 0.8
SNIP1-203ENST00000493916 PAMR1Q6UXH9 720 aa20.06■□□□□ 0.8
SNIP1-203ENST00000493916 LSRQ86X29 649 aaPredicted RBP20.06■□□□□ 0.8
SNIP1-203ENST00000493916 ARMC8Q8IUR7 673 aa20.06■□□□□ 0.8
SNIP1-203ENST00000493916 CCDC103Q8IW40 242 aa20.06■□□□□ 0.8
SNIP1-203ENST00000493916 LIME1Q9H400 295 aa20.06■□□□□ 0.8
SNIP1-203ENST00000493916 ITGB1BP2Q9UKP3 347 aa20.06■□□□□ 0.8
SNIP1-203ENST00000493916 MPDZO75970 2070 aa20.06■□□□□ 0.8
SNIP1-203ENST00000493916 SPG11Q96JI7 2443 aa20.05■□□□□ 0.8
SNIP1-203ENST00000493916 A0A1W2PPR1 153 aa20.05■□□□□ 0.8
SNIP1-203ENST00000493916 FXYD1O00168 92 aa20.05■□□□□ 0.8
SNIP1-203ENST00000493916 RAMP1O60894 148 aa20.05■□□□□ 0.8
SNIP1-203ENST00000493916 MFN2O95140 757 aa20.05■□□□□ 0.8
SNIP1-203ENST00000493916 ADAP00813 363 aa20.05■□□□□ 0.8
SNIP1-203ENST00000493916 HTR2AP28223 471 aa20.05■□□□□ 0.8
SNIP1-203ENST00000493916 PCGF2P35227 344 aa20.05■□□□□ 0.8
SNIP1-203ENST00000493916 BNIP2Q12982 314 aa20.05■□□□□ 0.8
SNIP1-203ENST00000493916 GLIPR1L2Q4G1C9 344 aa20.05■□□□□ 0.8
SNIP1-203ENST00000493916 REP15Q6BDI9 236 aa20.05■□□□□ 0.8
SNIP1-203ENST00000493916 OR8J3Q8NGG0 315 aa20.05■□□□□ 0.8
SNIP1-203ENST00000493916 STK35Q8TDR2 534 aa20.05■□□□□ 0.8
SNIP1-203ENST00000493916 ZNF775Q96BV0 537 aaPredicted RBP20.05■□□□□ 0.8
SNIP1-203ENST00000493916 ZC3HAV1LQ96H79 300 aaKnown RBP20.05■□□□□ 0.8
SNIP1-203ENST00000493916 SH3GL1Q99961 368 aa20.05■□□□□ 0.8
SNIP1-203ENST00000493916 RPS6KB2Q9UBS0 482 aa20.05■□□□□ 0.8
SNIP1-203ENST00000493916 TESQ9UGI8 421 aaKnown RBP20.05■□□□□ 0.8
SNIP1-203ENST00000493916 PRSS50Q9UI38 385 aa20.05■□□□□ 0.8
SNIP1-203ENST00000493916 NOSIPQ9Y314 301 aaKnown RBP20.05■□□□□ 0.8
SNIP1-203ENST00000493916 CAPN7Q9Y6W3 813 aa20.05■□□□□ 0.8
SNIP1-203ENST00000493916 MRASO14807 208 aa20.04■□□□□ 0.8
SNIP1-203ENST00000493916 EDNRAP25101 427 aa20.04■□□□□ 0.8
SNIP1-203ENST00000493916 GZMMP51124 257 aa20.04■□□□□ 0.8
SNIP1-203ENST00000493916 DMTNQ08495 405 aa20.04■□□□□ 0.8
SNIP1-203ENST00000493916 CEACAM7Q14002 265 aa20.04■□□□□ 0.8
SNIP1-203ENST00000493916 MMEL1Q495T6 779 aa20.04■□□□□ 0.8
SNIP1-203ENST00000493916 C1orf140Q5VVS0 124 aa20.04■□□□□ 0.8
SNIP1-203ENST00000493916 NANOGP8Q6NSW7 305 aa20.04■□□□□ 0.8
SNIP1-203ENST00000493916 SNX32Q86XE0 403 aa20.04■□□□□ 0.8
SNIP1-203ENST00000493916 ZNF100Q8IYN0 542 aa20.04■□□□□ 0.8
SNIP1-203ENST00000493916 OR10A6Q8NH74 314 aa20.04■□□□□ 0.8
SNIP1-203ENST00000493916 KISS1RQ969F8 398 aaPredicted RBP20.04■□□□□ 0.8
SNIP1-203ENST00000493916 S100PBPQ96BU1 408 aa20.04■□□□□ 0.8
SNIP1-203ENST00000493916 LRRC58Q96CX6 371 aa20.04■□□□□ 0.8
SNIP1-203ENST00000493916 USB1Q9BQ65 265 aaKnown RBP20.04■□□□□ 0.8
SNIP1-203ENST00000493916 TRIM2Q9C040 744 aa20.04■□□□□ 0.8
SNIP1-203ENST00000493916 NANOGQ9H9S0 305 aa20.04■□□□□ 0.8
SNIP1-203ENST00000493916 SLC13A4Q9UKG4 626 aa20.04■□□□□ 0.8
SNIP1-203ENST00000493916 COX5AP20674 150 aa20.03■□□□□ 0.8
SNIP1-203ENST00000493916 IL32P24001 234 aa20.03■□□□□ 0.8
SNIP1-203ENST00000493916 LOXP28300 417 aaPredicted RBP20.03■□□□□ 0.8
SNIP1-203ENST00000493916 IST1P53990 364 aa20.03■□□□□ 0.8
SNIP1-203ENST00000493916 ITGADQ13349 1161 aa20.03■□□□□ 0.8
SNIP1-203ENST00000493916 SLC17A1Q14916 467 aa20.03■□□□□ 0.8
SNIP1-203ENST00000493916 OR7A5Q15622 319 aa20.03■□□□□ 0.8
SNIP1-203ENST00000493916 OTUD3Q5T2D3 398 aaPredicted RBP20.03■□□□□ 0.8
SNIP1-203ENST00000493916 OR52E4Q8NGH9 312 aa20.03■□□□□ 0.8
SNIP1-203ENST00000493916 DNAJA4Q8WW22 397 aaPredicted RBP20.03■□□□□ 0.8
SNIP1-203ENST00000493916 PIK3IP1Q96FE7 263 aa20.03■□□□□ 0.8
SNIP1-203ENST00000493916 TAPBPLQ9BX59 468 aa20.03■□□□□ 0.8
SNIP1-203ENST00000493916 SLC9A8Q9Y2E8 581 aa20.03■□□□□ 0.8
SNIP1-203ENST00000493916 A0A1B0GWA3 101 aa20.02■□□□□ 0.8
SNIP1-203ENST00000493916 AQP7P3A6NL99 342 aa20.02■□□□□ 0.8
SNIP1-203ENST00000493916 ELOA3DA6NLF2 546 aaPredicted RBP20.02■□□□□ 0.8
SNIP1-203ENST00000493916 FZD7O75084 574 aa20.02■□□□□ 0.8
SNIP1-203ENST00000493916 RAF1P04049 648 aa20.02■□□□□ 0.8
SNIP1-203ENST00000493916 PNMTP11086 282 aa20.02■□□□□ 0.8
SNIP1-203ENST00000493916 DNASE1P24855 282 aa20.02■□□□□ 0.8
SNIP1-203ENST00000493916 RGS8P57771 180 aaPredicted RBP20.02■□□□□ 0.8
SNIP1-203ENST00000493916 NCALDP61601 193 aa20.02■□□□□ 0.8
SNIP1-203ENST00000493916 VMACQ2NL98 169 aa20.02■□□□□ 0.8
SNIP1-203ENST00000493916 ELOA3BQ3SY89 546 aa20.02■□□□□ 0.8
SNIP1-203ENST00000493916 BEX5Q5H9J7 111 aa20.02■□□□□ 0.8
SNIP1-203ENST00000493916 INTS11Q5TA45 600 aaKnown RBP20.02■□□□□ 0.8
SNIP1-203ENST00000493916 FAM91A1Q658Y4 838 aa20.02■□□□□ 0.8
SNIP1-203ENST00000493916 PATL1Q86TB9 770 aaKnown RBP20.02■□□□□ 0.8
SNIP1-203ENST00000493916 CALHM3Q86XJ0 350 aa20.02■□□□□ 0.8
SNIP1-203ENST00000493916 PCYOX1LQ8NBM8 494 aa20.02■□□□□ 0.8
SNIP1-203ENST00000493916 ELOA3Q8NG57 546 aa20.02■□□□□ 0.8
SNIP1-203ENST00000493916 APH1AQ96BI3 265 aa20.02■□□□□ 0.8
SNIP1-203ENST00000493916 MBD6Q96DN6 1003 aa20.02■□□□□ 0.8
SNIP1-203ENST00000493916 SF3B5Q9BWJ5 86 aaKnown RBP20.02■□□□□ 0.8
SNIP1-203ENST00000493916 PIF1Q9H611 641 aa20.02■□□□□ 0.8
SNIP1-203ENST00000493916 PLEKHA6Q9Y2H5 1048 aa20.02■□□□□ 0.8
SNIP1-203ENST00000493916 FLVCR1Q9Y5Y0 555 aa20.02■□□□□ 0.8
SNIP1-203ENST00000493916 KLF4O43474 513 aa20.01■□□□□ 0.79
SNIP1-203ENST00000493916 MRPL33O75394 65 aaKnown RBP20.01■□□□□ 0.79
SNIP1-203ENST00000493916 AKR7A3O95154 331 aa20.01■□□□□ 0.79
SNIP1-203ENST00000493916 ATE1O95260 518 aa20.01■□□□□ 0.79
SNIP1-203ENST00000493916 AHSA1O95433 338 aa20.01■□□□□ 0.79
SNIP1-203ENST00000493916 C8BP07358 591 aa20.01■□□□□ 0.79
SNIP1-203ENST00000493916 NTF4P34130 210 aa20.01■□□□□ 0.79
SNIP1-203ENST00000493916 P2RY4P51582 365 aa20.01■□□□□ 0.79
SNIP1-203ENST00000493916 EGR4Q05215 589 aa20.01■□□□□ 0.79
SNIP1-203ENST00000493916 TSC22D1Q15714 1073 aa20.01■□□□□ 0.79
SNIP1-203ENST00000493916 RABL3Q5HYI8 236 aa20.01■□□□□ 0.79
SNIP1-203ENST00000493916 ALG10BQ5I7T1 473 aa20.01■□□□□ 0.79
SNIP1-203ENST00000493916 FBXW9Q5XUX1 488 aa20.01■□□□□ 0.79
SNIP1-203ENST00000493916 ULK3Q6PHR2 472 aa20.01■□□□□ 0.79
SNIP1-203ENST00000493916 C5orf46Q6UWT4 87 aa20.01■□□□□ 0.79
SNIP1-203ENST00000493916 SPNS3Q6ZMD2 512 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms