RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 FOXE3Q13461 319 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 LARS2Q15031 903 aaKnown RBP5.96□□□□□ -1.46
TRA2B-216ENST00000493864 CD226Q15762 336 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 NPTX1Q15818 432 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 NTRK2Q16620 822 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 NRF1Q16656 503 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 MEP1AQ16819 746 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 NDUFAF6Q330K2 333 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 IQCCQ4KMZ1 466 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 LIN52Q52LA3 116 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 FAM98BQ52LJ0 330 aaKnown RBP5.96□□□□□ -1.46
TRA2B-216ENST00000493864 IFI44LQ53G44 452 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 MRPL2Q5T653 305 aaKnown RBP5.96□□□□□ -1.46
TRA2B-216ENST00000493864 ABHD17BQ5VST6 288 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 FNDC7Q5VTL7 733 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 AAGABQ6PD74 315 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 OPN5Q6U736 354 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 LINC00696Q6ZRV3 163 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 CARM1Q86X55 608 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 LACC1Q8IV20 430 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 ZDHHC21Q8IVQ6 265 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 BEST3Q8N1M1 668 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 TMEM156Q8N614 296 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 ZNF614Q8N883 585 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 GATSQ8NAP1 163 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 POGLUT1Q8NBL1 392 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 OR10G3Q8NGC4 313 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 VANGL1Q8TAA9 524 aaPredicted RBP5.96□□□□□ -1.46
TRA2B-216ENST00000493864 GRHL3Q8TE85 626 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 APOBEC4Q8WW27 367 aaKnown RBP5.96□□□□□ -1.46
TRA2B-216ENST00000493864 LRTOMTQ8WZ04 291 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 LZICQ8WZA0 190 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 PROX1Q92786 737 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 STMN2Q93045 179 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 SPACA9Q96E40 222 aaPredicted RBP5.96□□□□□ -1.46
TRA2B-216ENST00000493864 ARSGQ96EG1 525 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 ARHGDIGQ99819 225 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 KLHDC3Q9BQ90 382 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 CHID1Q9BWS9 393 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 AMBRA1Q9C0C7 1298 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 CACYBPQ9HB71 228 aaKnown RBP5.96□□□□□ -1.46
TRA2B-216ENST00000493864 CPNE5Q9HCH3 593 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 ARMC1Q9NVT9 282 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 ANKRD10Q9NXR5 420 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 NKX1-2Q9UD57 310 aaPredicted RBP5.96□□□□□ -1.46
TRA2B-216ENST00000493864 BAG5Q9UL15 447 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 NTNG1Q9Y2I2 539 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 EML6Q6ZMW3 1958 aa5.96□□□□□ -1.46
TRA2B-216ENST00000493864 EXPH5Q8NEV8 1989 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 COL6A6A6NMZ7 2263 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 SPTA1P02549 2419 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 GAGE12BA1L429 117 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 GAGE12HA6NDE8 117 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 E9PLN8 166 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 hCG_2039718K7EN88 272 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 M0R3H8 397 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 SYT5O00445 386 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 TP53I11O14683 189 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 RRP8O43159 456 aaKnown RBP5.95□□□□□ -1.46
TRA2B-216ENST00000493864 SCO2O43819 266 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 TPST2O60704 377 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 DIRAS1O95057 198 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 BAG2O95816 211 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 WDPCPO95876 746 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 CSTAP01040 98 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 NGFRP08138 427 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 ELANEP08246 267 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 GKN3PP0CG01 181 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 CCL3P10147 92 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 ANPEPP15144 967 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 HPGDP15428 266 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 RHCEP18577 417 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 NR4A1P22736 598 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 PSMA4P25789 261 aaKnown RBP5.95□□□□□ -1.46
TRA2B-216ENST00000493864 PTGDSP41222 190 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 CASP3P42574 277 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 ACAA2P42765 397 aaKnown RBP5.95□□□□□ -1.46
TRA2B-216ENST00000493864 ZNF136P52737 540 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 GAS1P54826 345 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 OC90Q02509 493 aaPredicted RBP5.95□□□□□ -1.46
TRA2B-216ENST00000493864 RIPK1Q13546 671 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 TUBA3CQ13748 450 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 FGFBP1Q14512 234 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 RCN1Q15293 331 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 RNF220Q5VTB9 566 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 AGAP7PQ5VUJ5 663 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 IRAK1BP1Q5VVH5 260 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 SLC22A10Q63ZE4 541 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 OR5M10Q6IEU7 315 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 HMBOX1Q6NT76 420 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 ZFP1Q6P2D0 407 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 TUBA3EQ6PEY2 450 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 ISLR2Q6UXK2 745 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 PIWIL3Q7Z3Z3 882 aaKnown RBP5.95□□□□□ -1.46
TRA2B-216ENST00000493864 MDGA2Q7Z553 956 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 AMIGO2Q86SJ2 522 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 HEATR5AQ86XA9 2040 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 APLFQ8IW19 511 aaPredicted RBP5.95□□□□□ -1.46
TRA2B-216ENST00000493864 ZNF527Q8NB42 609 aa5.95□□□□□ -1.46
TRA2B-216ENST00000493864 OR6T1Q8NGN1 323 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms