RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 OR6K3Q8NGY3 331 aa9.28□□□□□ -0.92
TRAPPC12-222ENST00000493792 LINC01560Q8TB33 94 aa9.28□□□□□ -0.92
TRAPPC12-222ENST00000493792 C3orf49Q96BT1 292 aa9.28□□□□□ -0.92
TRAPPC12-222ENST00000493792 NAA11Q9BSU3 229 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC12-222ENST00000493792 TAPBPLQ9BX59 468 aa9.28□□□□□ -0.92
TRAPPC12-222ENST00000493792 TRIM2Q9C040 744 aa9.28□□□□□ -0.92
TRAPPC12-222ENST00000493792 KLHL4Q9C0H6 718 aa9.28□□□□□ -0.92
TRAPPC12-222ENST00000493792 ADAM19Q9H013 955 aa9.28□□□□□ -0.92
TRAPPC12-222ENST00000493792 TMEM27Q9HBJ8 222 aa9.28□□□□□ -0.92
TRAPPC12-222ENST00000493792 CCM2LQ9NUG4 571 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC12-222ENST00000493792 TMEM181Q9P2C4 612 aa9.28□□□□□ -0.92
TRAPPC12-222ENST00000493792 KLHL9Q9P2J3 617 aa9.28□□□□□ -0.92
TRAPPC12-222ENST00000493792 KLHL13Q9P2N7 655 aa9.28□□□□□ -0.92
TRAPPC12-222ENST00000493792 JMJD1CQ15652 2540 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 A0A1B0GWA3 101 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 A8MVM7 634 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 FAM220BPB1ANY3 271 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 ZNF208O43345 1280 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 GCM2O75603 506 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 DCTN3O75935 186 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 AHSA1O95433 338 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 PMS2P2O95744 297 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 IFNA14P01570 189 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 YES1P07947 543 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 PTNP21246 168 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 FPR1P21462 350 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 GTF2E2P29084 291 aaKnown RBP9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 PEX19P40855 299 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 GZMMP51124 257 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 MAP2K6P52564 334 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 SLC7A2P52569 658 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 SLC35A1P78382 337 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 MXRA7P84157 204 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 LIPEQ05469 1076 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 FAM27E3Q08E93 113 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 CEACAM7Q14002 265 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 OR7A5Q15622 319 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 DUSP7Q16829 419 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 ALG10BQ5I7T1 473 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 ZNF474Q6S9Z5 364 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 NUFIP2Q7Z417 695 aaKnown RBP9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 TMEM200AQ86VY9 491 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 CALHM3Q86XJ0 350 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 MICU2Q8IYU8 434 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 PIGXQ8TBF5 258 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 PROX1Q92786 737 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 SLC35B4Q969S0 331 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 TAMM41Q96BW9 452 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 SLC25A36Q96CQ1 311 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 ZNF583Q96ND8 569 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 LRRC37BQ96QE4 947 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 ZNF300Q96RE9 604 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 CCT8L2Q96SF2 557 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 MCHR1Q99705 422 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 HOPXQ9BPY8 73 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 RSPO3Q9BXY4 272 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 MYLK2Q9H1R3 596 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 LIME1Q9H400 295 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 FANCFQ9NPI8 374 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 ADPRHL2Q9NX46 363 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 CRIM1Q9NZV1 1036 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 JKAMPQ9P055 326 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 C6orf203Q9P0P8 240 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 TESQ9UGI8 421 aaKnown RBP9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 AP3M1Q9Y2T2 418 aa9.27□□□□□ -0.93
TRAPPC12-222ENST00000493792 ELOVL7A1L3X0 281 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 CPSF4LA6NMK7 179 aaKnown RBP9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 CASKO14936 926 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 CYTIPO60759 359 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 AKR7A3O95154 331 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 LGI1O95970 557 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 CGAP01215 116 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 GPIP06744 558 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 CD8BP10966 210 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 IMPDH2P12268 514 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 HTR2AP28223 471 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 PRDX6P30041 224 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 CD79BP40259 229 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 PSME3P61289 254 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 ADAM8P78325 824 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 SORDQ00796 357 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 LTBQ06643 244 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 OR1Q1Q15612 314 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 OTUD3Q5T2D3 398 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 GKAP1Q5VSY0 366 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 C1orf140Q5VVS0 124 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 ANKRD34AQ69YU3 496 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 ULK3Q6PHR2 472 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 PIGWQ7Z7B1 504 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 ATG4DQ86TL0 474 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 P3H2Q8IVL5 708 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 CCDC103Q8IW40 242 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 SLC15A3Q8IY34 581 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 ZNF100Q8IYN0 542 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 C10orf53Q8N6V4 93 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 GPR32P1Q8NGA4 272 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 RASSF5Q8WWW0 418 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 NINJ1Q92982 152 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 SLC47A1Q96FL8 570 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms