RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 ANGPTL4Q9BY76 406 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 TTTY12Q9BZ98 90 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 LAT2Q9GZY6 243 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 DEFB127Q9H1M4 99 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 SH2D2AQ9NP31 389 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 KCNJ16Q9NPI9 418 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 CCM2LQ9NUG4 571 aaPredicted RBP10.97□□□□□ -0.65
UPF3A-210ENST00000493727 RNF6Q9Y252 685 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 AP4S1Q9Y587 144 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 FAM166BA8MTA8 275 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 NPIPA2E9PIF3 369 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 NPIPA3F8WFD2 350 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 H0Y3Z8 333 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 BCAS1O75363 584 aaPredicted RBP10.96□□□□□ -0.65
UPF3A-210ENST00000493727 KRT36O76013 467 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 GLSO94925 669 aaPredicted RBP10.96□□□□□ -0.65
UPF3A-210ENST00000493727 SNX4O95219 450 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 EPPINO95925 133 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 HOXD4P09016 255 aaPredicted RBP10.96□□□□□ -0.65
UPF3A-210ENST00000493727 FCGR1AP12314 374 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 PGCP20142 388 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 PTGDSP41222 190 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 SLC6A8P48029 635 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 DNASE1L1P49184 302 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 P2RX1P51575 399 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 COPZ1P61923 177 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 HOXC5Q00444 222 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 ZNF117Q03924 483 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 SKP2Q13309 424 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 CBFBQ13951 182 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 HYAL4Q2M3T9 481 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 FNDC7Q5VTL7 733 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 OR5M10Q6IEU7 315 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 PLEKHM3Q6ZWE6 761 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 RBM45Q8IUH3 476 aaKnown RBP10.96□□□□□ -0.65
UPF3A-210ENST00000493727 GRAMD2AQ8IUY3 354 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 LACC1Q8IV20 430 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 MARVELD2Q8N4S9 558 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 OR6T1Q8NGN1 323 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 RNF138Q8WVD3 245 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 SLC35B4Q969S0 331 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 MCHR1Q99705 422 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 ZNF559Q9BR84 538 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 RTN4RQ9BZR6 473 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 S100A14Q9HCY8 104 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 IL1RAPQ9NPH3 570 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 EXOSC3Q9NQT5 275 aaKnown RBP10.96□□□□□ -0.65
UPF3A-210ENST00000493727 SELENONQ9NZV5 590 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 RPS6KB2Q9UBS0 482 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 TESQ9UGI8 421 aaKnown RBP10.96□□□□□ -0.65
UPF3A-210ENST00000493727 BOKQ9UMX3 212 aaPredicted RBP10.96□□□□□ -0.65
UPF3A-210ENST00000493727 CHST2Q9Y4C5 530 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 ENPP4Q9Y6X5 453 aa10.96□□□□□ -0.65
UPF3A-210ENST00000493727 A0A0G2JMM0 328 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 A0A1B0GVC2 190 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 A0A1W2PPB8 328 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 A0A1W2PRS3 328 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 SLC22A31A6NKX4 558 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 CPSF4LA6NMK7 179 aaKnown RBP10.95□□□□□ -0.66
UPF3A-210ENST00000493727 C17orf51A8MQB3 221 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 KIR3DP1A8MWS1 328 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 AQP7O14520 342 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 GNGT2O14610 69 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 SUSD5O60279 629 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 WDR1O75083 606 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 TIPRLO75663 272 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 DIRAS1O95057 198 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 BAG2O95816 211 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 SEMG1P04279 462 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 LINGO3P0C6S8 592 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 ACVR2AP27037 513 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 YAP1P46937 504 aaKnown RBP10.95□□□□□ -0.66
UPF3A-210ENST00000493727 ZNF41P51814 821 aaPredicted RBP10.95□□□□□ -0.66
UPF3A-210ENST00000493727 GAS1P54826 345 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 SUMO3P55854 103 aaPredicted RBP10.95□□□□□ -0.66
UPF3A-210ENST00000493727 TAS2R41P59536 307 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 VLDLRP98155 873 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 SPIBQ01892 262 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 PMPCAQ10713 525 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 EPS8Q12929 822 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 SLC10A1Q14973 349 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 RCN1Q15293 331 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 TOMM20Q15388 145 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 GXYLT1Q4G148 440 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 AAGABQ6PD74 315 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 CBLN3Q6UW01 205 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 C22orf34Q6ZV56 151 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 TRILQ7L0X0 811 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 PLCZ1Q86YW0 608 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 CADM2Q8N3J6 435 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 TMEM251Q8N6I4 163 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 FAM71CQ8NEG0 241 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 OR4D11Q8NGI4 311 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 OR1J4Q8NGS1 313 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 OR5W2Q8NH69 310 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 SLCO4A1Q96BD0 722 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 SARAFQ96BY9 339 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 ARSGQ96EG1 525 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 DUS3LQ96G46 650 aaKnown RBP10.95□□□□□ -0.66
UPF3A-210ENST00000493727 TMEM41AQ96HV5 264 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms