RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 ENPP1P22413 925 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 FKBP2P26885 142 aaKnown RBP10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 PTGER4P35408 488 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 IDUAP35475 653 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 RPS5P46782 204 aaKnown RBP10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 NUP107P57740 925 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 OR2B6P58173 313 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 RPS3AP61247 264 aaKnown RBP10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 ST3GAL3Q11203 375 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 KPNB1Q14974 876 aaKnown RBP10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 TRAM2Q15035 370 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 PON3Q15166 354 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 SEC23BQ15437 767 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 ZNF239Q16600 458 aaKnown RBP10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 FAM98BQ52LJ0 330 aaKnown RBP10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 TBPL2Q6SJ96 375 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 B3GNT6Q6ZMB0 384 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 CYP4Z1Q86W10 505 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 C9orf106Q8NAJ2 232 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 PAPD5Q8NDF8 572 aaKnown RBP10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 PFN4Q8NHR9 129 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 FNDC9Q8TBE3 224 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 ROBO4Q8WZ75 1007 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 VKORC1Q9BQB6 163 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 TTYH2Q9BSA4 534 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 CHID1Q9BWS9 393 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 CALHM2Q9HA72 323 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 CCM2LQ9NUG4 571 aaPredicted RBP10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 FAM32AQ9Y421 112 aaKnown RBP10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 ZNF175Q9Y473 711 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 KIAA1549Q9HCM3 1950 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 ESPL1Q14674 2120 aa10.84□□□□□ -0.67
RHBDF1-211ENST00000493647 TRAV36DV7A0A075B6V5 113 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 A0A087WUU8 490 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 A0A1W2PRQ8 180 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 MBD3L4A6NDZ8 208 aaPredicted RBP10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 MBD3L3A6NE82 208 aaPredicted RBP10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 MBD3L5A6NJ08 208 aaPredicted RBP10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 SLC22A20A6NK97 555 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 J3QKU1 62 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 CCL21O00585 134 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 KPNA4O00629 521 aaPredicted RBP10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 SMAD9O15198 467 aaKnown RBP10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 FKBP6O75344 327 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 AHSA1O95433 338 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 HOXD4P09016 255 aaPredicted RBP10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 ITGA2P17301 1181 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 RBM34P42696 430 aaKnown RBP10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 LIMS1P48059 325 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 CASP6P55212 293 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 RAC3P60763 192 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 ACTR3P61158 418 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 ADORA2A-AS1P86434 159 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 SPIBQ01892 262 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 DGCR6Q14129 220 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 OR7A5Q15622 319 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 SGCBQ16585 318 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 C4orf17Q53FE4 359 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 PDSS1Q5T2R2 415 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 PODNL1Q6PEZ8 512 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 TTC33Q6PID6 262 aaPredicted RBP10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 FJX1Q86VR8 437 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 MEX3DQ86XN8 651 aaKnown RBP10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 NAXEQ8NCW5 288 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 MFSD8Q8NHS3 518 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 MBD3L2Q8NHZ7 208 aaPredicted RBP10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 SLC7A13Q8TCU3 470 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 TMEM239Q8WW34 195 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 WNT2BQ93097 391 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 POP5Q969H6 163 aaKnown RBP10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 DUS3LQ96G46 650 aaKnown RBP10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 RSRC1Q96IZ7 334 aaKnown RBP10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 MOGAT1Q96PD6 335 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 ZNF347Q96SE7 839 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 DENND2DQ9H6A0 471 aaPredicted RBP10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 C20orf141Q9NUB4 165 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 SEC14L4Q9UDX3 406 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 TRAPPC4Q9Y296 219 aa10.83□□□□□ -0.68
RHBDF1-211ENST00000493647 HIVEP3Q5T1R4 2406 aa10.82□□□□□ -0.68
RHBDF1-211ENST00000493647 ENO4A6NNW6 628 aa10.82□□□□□ -0.68
RHBDF1-211ENST00000493647 SYNGR4O95473 234 aa10.82□□□□□ -0.68
RHBDF1-211ENST00000493647 FPR1P21462 350 aa10.82□□□□□ -0.68
RHBDF1-211ENST00000493647 CBLP22681 906 aa10.82□□□□□ -0.68
RHBDF1-211ENST00000493647 RRM2P31350 389 aa10.82□□□□□ -0.68
RHBDF1-211ENST00000493647 P2RY4P51582 365 aa10.82□□□□□ -0.68
RHBDF1-211ENST00000493647 AGFG1P52594 562 aaKnown RBP10.82□□□□□ -0.68
RHBDF1-211ENST00000493647 CSNK2A1P68400 391 aaPredicted RBP10.82□□□□□ -0.68
RHBDF1-211ENST00000493647 H3F3AP84243 136 aa10.82□□□□□ -0.68
RHBDF1-211ENST00000493647 SRSF1Q07955 248 aaKnown RBP eCLIP10.82□□□□□ -0.68
RHBDF1-211ENST00000493647 PMPCAQ10713 525 aa10.82□□□□□ -0.68
RHBDF1-211ENST00000493647 FGD3Q5JSP0 725 aa10.82□□□□□ -0.68
RHBDF1-211ENST00000493647 FAM69AQ5T7M9 428 aa10.82□□□□□ -0.68
RHBDF1-211ENST00000493647 ABLIM2Q6H8Q1 611 aa10.82□□□□□ -0.68
RHBDF1-211ENST00000493647 PPP4R4Q6NUP7 873 aa10.82□□□□□ -0.68
RHBDF1-211ENST00000493647 C5orf46Q6UWT4 87 aa10.82□□□□□ -0.68
RHBDF1-211ENST00000493647 CHMP1BQ7LBR1 199 aa10.82□□□□□ -0.68
RHBDF1-211ENST00000493647 SLC46A3Q7Z3Q1 461 aa10.82□□□□□ -0.68
RHBDF1-211ENST00000493647 OR4C15Q8NGM1 316 aa10.82□□□□□ -0.68
RHBDF1-211ENST00000493647 OR6S1Q8NH40 331 aa10.82□□□□□ -0.68
RHBDF1-211ENST00000493647 OR52J3Q8NH60 311 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms