RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 WDR88Q6ZMY6 472 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 TRILQ7L0X0 811 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 ADGRG3Q86Y34 549 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 P3H2Q8IVL5 708 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 TMEM239Q8WW34 195 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 HS6ST2Q96MM7 605 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 EPYCQ99645 322 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 PRSS27Q9BQR3 290 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 ANKRD19PQ9H560 264 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 TMEM185BQ9H7F4 350 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 RNPEPL1Q9HAU8 725 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 PLSCR2Q9NRY7 297 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 PNPLA3Q9NST1 481 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 MAN2C1Q9NTJ4 1040 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 TNFRSF10DQ9UBN6 386 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 CHRNA9Q9UGM1 479 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 ARHGAP21Q5T5U3 1957 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 HECTD1Q9ULT8 2610 aa12.08□□□□□ -0.47
MSH6-208ENST00000493177 SPTBN1Q01082 2364 aaKnown RBP12.08□□□□□ -0.47
MSH6-208ENST00000493177 C7orf72A4D263 438 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 ETV2O00321 342 aaPredicted RBP12.08□□□□□ -0.48
MSH6-208ENST00000493177 AQP7O14520 342 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 OR10H3O60404 316 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 HCN1O60741 890 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 IGHG3P01860 377 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 OPN1LWP04000 364 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 POU3F2P20265 443 aaPredicted RBP12.08□□□□□ -0.48
MSH6-208ENST00000493177 IL11P20809 199 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 ELK4P28324 431 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 SFTPDP35247 375 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 RBM34P42696 430 aaKnown RBP12.08□□□□□ -0.48
MSH6-208ENST00000493177 UGT2B15P54855 530 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 DLX5P56178 289 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 B3GALT5-AS1P59052 145 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 GK3PQ14409 553 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 LAPTM4AQ15012 233 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 C3orf33Q6P1S2 294 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 TBPL2Q6SJ96 375 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 CHERPQ8IWX8 916 aaKnown RBP12.08□□□□□ -0.48
MSH6-208ENST00000493177 C10orf53Q8N6V4 93 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 OR4C15Q8NGM1 316 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 OR5K1Q8NHB7 308 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 SLC7A13Q8TCU3 470 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 ASB5Q8WWX0 329 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 ACOT11Q8WXI4 607 aaPredicted RBP12.08□□□□□ -0.48
MSH6-208ENST00000493177 RND1Q92730 232 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 DDIT4LQ96D03 193 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 DNAJA3Q96EY1 480 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 DMRTA2Q96SC8 542 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 NTN4Q9HB63 628 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 ACKR4Q9NPB9 350 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 KRCC1Q9NPI7 259 aaPredicted RBP12.08□□□□□ -0.48
MSH6-208ENST00000493177 PDP1Q9P0J1 537 aaPredicted RBP12.08□□□□□ -0.48
MSH6-208ENST00000493177 STX18Q9P2W9 335 aaKnown RBP12.08□□□□□ -0.48
MSH6-208ENST00000493177 NKX1-2Q9UD57 310 aaPredicted RBP12.08□□□□□ -0.48
MSH6-208ENST00000493177 MED31Q9Y3C7 131 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 ZNF337Q9Y3M9 751 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 FLNBO75369 2602 aaKnown RBP12.08□□□□□ -0.48
MSH6-208ENST00000493177 FLNCQ14315 2725 aa12.08□□□□□ -0.48
MSH6-208ENST00000493177 A0A087WUU8 490 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 SH3PXD2BA1X283 911 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 A8MVM7 634 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 G3V2T6 193 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 SEC14L5O43304 696 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 PIP5K1CO60331 668 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 ACVR2AP27037 513 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 GRNP28799 593 aaKnown RBP12.07□□□□□ -0.48
MSH6-208ENST00000493177 IFNGR2P38484 337 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 CACNA1DQ01668 2161 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 SLC34A1Q06495 639 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 CRYZQ08257 329 aaKnown RBP12.07□□□□□ -0.48
MSH6-208ENST00000493177 RIPK1Q13546 671 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 SEC23BQ15437 767 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 TRIP10Q15642 601 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 MICAQ29983 383 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 TMEM44Q2T9K0 475 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 SHQ1Q6PI26 577 aaKnown RBP12.07□□□□□ -0.48
MSH6-208ENST00000493177 B3GNT6Q6ZMB0 384 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 MBOAT2Q6ZWT7 520 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 TMEM179BQ7Z7N9 219 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 STK32CQ86UX6 486 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 HIPK1Q86Z02 1210 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 ZDHHC13Q8IUH4 622 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 NRMQ8IXM6 262 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 HS3ST5Q8IZT8 346 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 SVOPLQ8N434 492 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 OR10G2Q8NGC3 310 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 OR4K5Q8NGD3 323 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 PFN4Q8NHR9 129 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 PIGXQ8TBF5 258 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 GIPC3Q8TF64 312 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 TMEM43Q9BTV4 400 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 OR11A1Q9GZK7 315 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 STOML1Q9UBI4 398 aa12.07□□□□□ -0.48
MSH6-208ENST00000493177 PRRC2CQ9Y520 2896 aaKnown RBP12.06□□□□□ -0.48
MSH6-208ENST00000493177 USP9XQ93008 2570 aaPredicted RBP12.06□□□□□ -0.48
MSH6-208ENST00000493177 IGKV1D-42A0A075B6H8 117 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 A0A1B0GVC2 190 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 ZC3H12DA2A288 527 aaKnown RBP12.06□□□□□ -0.48
MSH6-208ENST00000493177 GJE1A6NN92 205 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms