RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 LAMP5Q9UJQ1 280 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 FOXJ3Q9UPW0 622 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 MGAT4DA6NG13 374 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 ARL6IP5O75915 188 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 FARS2O95363 451 aaKnown RBP8.96□□□□□ -0.98
VPS8-225ENST00000492449 PMS2P2O95744 297 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 MBP02144 154 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 CD14P08571 375 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 ITGA5P08648 1049 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 UCHL1P09936 223 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 NT5EP21589 574 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 DPP4P27487 766 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 DLSTP36957 453 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 BACE1P56817 501 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 LSM6P62312 80 aaKnown RBP8.96□□□□□ -0.98
VPS8-225ENST00000492449 PPP2CBP62714 309 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 PPP2CAP67775 309 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 CBFBQ13951 182 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 UBXN11Q5T124 520 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 C11orf88Q6PI97 169 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 UNQ6494/PRO21346Q6UXR6 183 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 FBXO16Q8IX29 292 aaPredicted RBP8.96□□□□□ -0.98
VPS8-225ENST00000492449 C3orf49Q96BT1 292 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 PPCDCQ96CD2 204 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 R3HDM4Q96D70 268 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 PIK3IP1Q96FE7 263 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 SPATA33Q96N06 139 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 NECAB3Q96P71 396 aaPredicted RBP8.96□□□□□ -0.98
VPS8-225ENST00000492449 SEPT5Q99719 369 aaPredicted RBP8.96□□□□□ -0.98
VPS8-225ENST00000492449 C19orf43Q9BQ61 176 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 TEX12Q9BXU0 123 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 RHOFQ9HBH0 211 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 GOLGA2P5Q9HBQ8 144 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 ARL15Q9NXU5 204 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 KCNIP3Q9Y2W7 256 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 ZNF337Q9Y3M9 751 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 KPTNQ9Y664 436 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 PIKFYVEQ9Y2I7 2098 aa8.96□□□□□ -0.98
VPS8-225ENST00000492449 A6NLC8 198 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 ZNF705EA8MWA4 302 aaPredicted RBP8.95□□□□□ -0.98
VPS8-225ENST00000492449 RNASEK-C17orf49H0YIS7 233 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 H0YIV9 168 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 INSIG1O15503 277 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 TSPAN3O60637 253 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 TPT1P13693 172 aaKnown RBP8.95□□□□□ -0.98
VPS8-225ENST00000492449 TIA1P31483 386 aaKnown RBP eCLIP8.95□□□□□ -0.98
VPS8-225ENST00000492449 AHRP35869 848 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 HTRA3P83110 453 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 FAAP20Q6NZ36 180 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 SSX6Q7RTT6 188 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 OR4K1Q8NGD4 311 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 OR56B1Q8NGI3 324 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 OR6T1Q8NGN1 323 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 OR5R1Q8NH85 324 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 SLC38A5Q8WUX1 472 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 NDC1Q9BTX1 674 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 RIOK2Q9BVS4 552 aaKnown RBP8.95□□□□□ -0.98
VPS8-225ENST00000492449 FNDC11Q9BVV2 318 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 OR51I1Q9H343 314 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 IL17CQ9P0M4 197 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 APBB3O95704 486 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 AK1P00568 194 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 CD1AP06126 327 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 FURINP09958 794 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 NME1P15531 152 aaKnown RBP8.95□□□□□ -0.98
VPS8-225ENST00000492449 IFNGR2P38484 337 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 RAP1AP62834 184 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 PIN1Q13526 163 aaPredicted RBP8.95□□□□□ -0.98
VPS8-225ENST00000492449 GPNMBQ14956 572 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 RPS26P11Q5JNZ5 115 aaPredicted RBP8.95□□□□□ -0.98
VPS8-225ENST00000492449 THEM4Q5T1C6 240 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 LYPLAL1Q5VWZ2 237 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 ETV3LQ6ZN32 361 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 PAQR4Q8N4S7 273 aaPredicted RBP8.95□□□□□ -0.98
VPS8-225ENST00000492449 ZNF461Q8TAF7 563 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 SMIM8Q96KF7 97 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 PRRC1Q96M27 445 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 HSPA12BQ96MM6 686 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 FCRL4Q96PJ5 515 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 SLC12A9Q9BXP2 914 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 TMEM231Q9H6L2 316 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 BPIFA1Q9NP55 256 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 TAS2R8Q9NYW2 309 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 VSX1Q9NZR4 365 aaPredicted RBP8.95□□□□□ -0.98
VPS8-225ENST00000492449 WASF3Q9UPY6 502 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 PRSS21Q9Y6M0 314 aa8.95□□□□□ -0.98
VPS8-225ENST00000492449 A0A1W2PPC1 479 aa8.94□□□□□ -0.98
VPS8-225ENST00000492449 ANKRD66B4E2M5 251 aa8.94□□□□□ -0.98
VPS8-225ENST00000492449 EPCAMP16422 314 aa8.94□□□□□ -0.98
VPS8-225ENST00000492449 HLA-GP17693 338 aa8.94□□□□□ -0.98
VPS8-225ENST00000492449 CD22P20273 847 aa8.94□□□□□ -0.98
VPS8-225ENST00000492449 ACVRL1P37023 503 aa8.94□□□□□ -0.98
VPS8-225ENST00000492449 UBE2MP61081 183 aaKnown RBP8.94□□□□□ -0.98
VPS8-225ENST00000492449 RAC1P63000 192 aa8.94□□□□□ -0.98
VPS8-225ENST00000492449 TNFRSF9Q07011 255 aa8.94□□□□□ -0.98
VPS8-225ENST00000492449 CHIT1Q13231 466 aa8.94□□□□□ -0.98
VPS8-225ENST00000492449 SRSF5Q13243 272 aaKnown RBP8.94□□□□□ -0.98
VPS8-225ENST00000492449 TAS1R1Q7RTX1 841 aa8.94□□□□□ -0.98
VPS8-225ENST00000492449 SERPINA9Q86WD7 417 aa8.94□□□□□ -0.98
VPS8-225ENST00000492449 CCDC54Q8NEL0 328 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms