RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 IGHV1-2P23083 117 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 THBS2P35442 1172 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 ACVR1BP36896 505 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 HTR3AP46098 478 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 DIO1P49895 249 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 HBA1P69905 142 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 MERTKQ12866 999 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 GNA13Q14344 377 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 TSC22D1Q15714 1073 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 ANKDD1AQ495B1 522 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 PDZK1Q5T2W1 519 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 ATAD3BQ5T9A4 648 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 INTS11Q5TA45 600 aaKnown RBP8.06□□□□□ -1.12
HDAC3-212ENST00000492407 ANXA8L1Q5VT79 327 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 ZNF544Q6NX49 715 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.06□□□□□ -1.12
HDAC3-212ENST00000492407 GRINAQ7Z429 371 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 ZER1Q7Z7L7 766 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 CMIPQ8IY22 773 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 C17orf78Q8N4C9 275 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 ZNF433Q8N7K0 673 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-212ENST00000492407 FAM71CQ8NEG0 241 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 ATP6V1C2Q8NEY4 427 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 KBTBD8Q8NFY9 601 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 OR10H5Q8NGA6 315 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 PIGXQ8TBF5 258 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 APH1AQ96BI3 265 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 TUBGCP3Q96CW5 907 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 BOD1Q96IK1 185 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 MUS81Q96NY9 551 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 OR5B2Q96R09 309 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 DHRS9Q9BPW9 319 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 TAS2R16Q9NYV7 291 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 KIF17Q9P2E2 1029 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 MALT1Q9UDY8 824 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 LGALS13Q9UHV8 139 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 CSPG4Q6UVK1 2322 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 COL6A5A8TX70 2615 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 NPIPA5A0A0B4J1W7 369 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 LOC105371267A0A1B0GV96 52 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 PRSS51A0A1B0GVH4 220 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 A0A1W2PNR3 127 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 SMIM23A6NLE4 172 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 ELOA3DA6NLF2 546 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-212ENST00000492407 ZNF716A6NP11 495 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 POM121CA8CG34 1229 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 NPIPA7E9PJI5 369 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 H7C417 338 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 FAAHO00519 579 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 ABCD4O14678 606 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 ZNF208O43345 1280 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 KIAA0513O60268 411 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 EIF1BO60739 113 aaKnown RBP8.05□□□□□ -1.12
HDAC3-212ENST00000492407 LYZL6O75951 148 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 OR5F1O95221 314 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 CSF3P09919 207 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 DHRS4L1P0CG22 281 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 NPIPA8P0DM63 369 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 G6PDP11413 515 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 SLC25A16P16260 332 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 UQCRC2P22695 453 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 TTKP33981 857 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 PGM1P36871 562 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 CDKN1AP38936 164 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 CBX5P45973 191 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 CDH11P55287 796 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 LOXL1Q08397 574 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-212ENST00000492407 GPR68Q15743 365 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 DPY19L1Q2PZI1 675 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 ELOA3BQ3SY89 546 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 GKAP1Q5VSY0 366 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-212ENST00000492407 SLC2A7Q6PXP3 512 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 C16orf62Q7Z3J2 963 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 ZNF554Q86TJ5 538 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 KRTCAP2Q8N6L1 136 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 ZNF614Q8N883 585 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 C1orf162Q8NEQ5 155 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-212ENST00000492407 ELOA3Q8NG57 546 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 OR5D16Q8NGK9 328 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 RFWD2Q8NHY2 731 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 TCP10LQ8TDR4 215 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 TESCQ96BS2 214 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 ZNF524Q96C55 264 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 MAELQ96JY0 434 aaKnown RBP8.05□□□□□ -1.12
HDAC3-212ENST00000492407 C3orf30Q96M34 536 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 ZNF300Q96RE9 604 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-212ENST00000492407 C1orf50Q9BV19 199 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 CCDC106Q9BWC9 280 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 AMBRA1Q9C0C7 1298 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 SCPEP1Q9HB40 452 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 VCX3AQ9NNX9 186 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-212ENST00000492407 CBLN4Q9NTU7 201 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 ASB6Q9NWX5 421 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 CHRNA9Q9UGM1 479 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 PRSS50Q9UI38 385 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 ZDHHC2Q9UIJ5 367 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 KCNE5Q9UJ90 142 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 DCTN4Q9UJW0 460 aa8.05□□□□□ -1.12
HDAC3-212ENST00000492407 TMEM5Q9Y2B1 443 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms