RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 CPOXP36551 454 aa14.51□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 PEX19P40855 299 aa14.51□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 RASGEF1BQ0VAM2 473 aa14.51□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 CYBRD1Q53TN4 286 aa14.51□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 TMEM201Q5SNT2 666 aa14.51□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 C1orf140Q5VVS0 124 aa14.51□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 TUSC5Q8IXB3 177 aa14.51□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 PGAM4Q8N0Y7 254 aa14.51□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 OR4D11Q8NGI4 311 aa14.51□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 PIGXQ8TBF5 258 aa14.51□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 RNF217Q8TC41 542 aa14.51□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 BCAS4Q8TDM0 211 aa14.51□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 SLC47A1Q96FL8 570 aa14.51□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 PSD2Q9BQI7 771 aa14.51□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 NAA11Q9BSU3 229 aaPredicted RBP14.51□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 BCO1Q9HAY6 547 aa14.51□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 GALNT8Q9NY28 637 aa14.51□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 ADA2Q9NZK5 511 aa14.51□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 INTS1Q8N201 2190 aaKnown RBP14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 LIPT2A6NK58 231 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 CPSF4LA6NMK7 179 aaKnown RBP14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 EIF1BO60739 113 aaKnown RBP14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 NPIPB7O75200 414 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 AHSA1O95433 338 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 GPIP06744 558 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 YES1P07947 543 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 FPR1P21462 350 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 MXRA7P84157 204 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 SORDQ00796 357 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 CEACAM7Q14002 265 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 OR7A5Q15622 319 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 ENTPD8Q5MY95 495 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 SWT1Q5T5J6 900 aaKnown RBP14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 ZNF613Q6PF04 617 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 CARM1Q86X55 608 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 KIF18BQ86Y91 864 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 RBM45Q8IUH3 476 aaKnown RBP14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 ZNF610Q8N9Z0 462 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 SLC38A4Q969I6 547 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 TAPBPLQ9BX59 468 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 C12orf49Q9H741 205 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 SLC24A3Q9HC58 644 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 PLSCR4Q9NRQ2 329 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 NDE1Q9NXR1 346 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 ING1Q9UK53 422 aaPredicted RBP14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 SH3GLB1Q9Y371 365 aa14.5□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 A0A087WUJ7 227 aa14.49□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 ZNF724A8MTY0 619 aa14.49□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 TNFRSF1BP20333 461 aa14.49□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 MNAT1P51948 309 aa14.49□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 CDH12P55289 794 aa14.49□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 H3F3AP84243 136 aa14.49□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 SLC25A3Q00325 362 aa14.49□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 EGR4Q05215 589 aa14.49□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 PDK3Q15120 406 aa14.49□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 ZNF474Q6S9Z5 364 aaPredicted RBP14.49□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 PAQR6Q6TCH4 344 aa14.49□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 C5orf46Q6UWT4 87 aa14.49□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 C16orf89Q6UX73 402 aa14.49□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 NUFIP2Q7Z417 695 aaKnown RBP14.49□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 ADAMTS16Q8TE57 1224 aa14.49□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 LZICQ8WZA0 190 aa14.49□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 TPD52L3Q96J77 140 aa14.49□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 ZNF300Q96RE9 604 aaPredicted RBP14.49□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 PCDHAC1Q9H158 963 aa14.49□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 ADPRHL2Q9NX46 363 aa14.49□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 EMC3Q9P0I2 261 aa14.49□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 IGKV1D-42A0A075B6H8 117 aa14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 IGKV3D-15A0A087WSY6 115 aa14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 TRAPPC13A5PLN9 417 aa14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 ZNF716A6NP11 495 aa14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 ZNF814B7Z6K7 855 aa14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 CHP2O43745 196 aa14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 AKR7A3O95154 331 aa14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 GGT1P19440 569 aa14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 CD79BP40259 229 aa14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 RPS5P46782 204 aaKnown RBP14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 SELENOWP63302 87 aa14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 SNTB1Q13884 538 aaKnown RBP14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 SAMD4BQ5PRF9 694 aaKnown RBP14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 OTUD3Q5T2D3 398 aaPredicted RBP14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 STK32CQ86UX6 486 aa14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 CCDC103Q8IW40 242 aa14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 MFSD8Q8NHS3 518 aa14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 FAM162AQ96A26 154 aa14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 KTI12Q96EK9 354 aaPredicted RBP14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 NSL1Q96IY1 281 aa14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 PTDSS2Q9BVG9 487 aa14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 ELOVL5Q9NYP7 299 aa14.48□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 TRAV36DV7A0A075B6V5 113 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 AQP7P3A6NL99 342 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 RAMP1O60894 148 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 ZNF682O95780 498 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 SERPINA1P01009 418 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 POU2F1P14859 743 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 NCK1P16333 377 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 CALB2P22676 271 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 GTF2E2P29084 291 aaKnown RBP14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 KIR2DL3P43628 341 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 OR1E2P47887 323 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms