RNA–Protein interactions for RNA: ENST00000491332.1

NCSTN-213, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-213ENST00000491332 MAGEA8P43361 318 aa3.83□□□□□ -1.8
NCSTN-213ENST00000491332 NCBP1Q09161 790 aaKnown RBP3.83□□□□□ -1.8
NCSTN-213ENST00000491332 HERPUD1Q15011 391 aa3.83□□□□□ -1.8
NCSTN-213ENST00000491332 CCDC14Q49A88 953 aa3.83□□□□□ -1.8
NCSTN-213ENST00000491332 CARD16Q5EG05 197 aa3.83□□□□□ -1.8
NCSTN-213ENST00000491332 ERI1Q8IV48 349 aaKnown RBP3.83□□□□□ -1.8
NCSTN-213ENST00000491332 CCDC71LQ8N9Z2 235 aa3.83□□□□□ -1.8
NCSTN-213ENST00000491332 BHLHE23Q8NDY6 225 aa3.83□□□□□ -1.8
NCSTN-213ENST00000491332 OR8J1Q8NGP2 316 aa3.83□□□□□ -1.8
NCSTN-213ENST00000491332 SETD7Q8WTS6 366 aaKnown RBP3.83□□□□□ -1.8
NCSTN-213ENST00000491332 SCFD1Q8WVM8 642 aa3.83□□□□□ -1.8
NCSTN-213ENST00000491332 UBE2E3Q969T4 207 aa3.83□□□□□ -1.8
NCSTN-213ENST00000491332 RPRD1AQ96P16 312 aaPredicted RBP3.83□□□□□ -1.8
NCSTN-213ENST00000491332 RNF2Q99496 336 aa3.83□□□□□ -1.8
NCSTN-213ENST00000491332 SH2D2AQ9NP31 389 aa3.83□□□□□ -1.8
NCSTN-213ENST00000491332 KIF25Q9UIL4 384 aa3.83□□□□□ -1.8
NCSTN-213ENST00000491332 NAP1L2Q9ULW6 460 aaPredicted RBP3.83□□□□□ -1.8
NCSTN-213ENST00000491332 STAP1Q9ULZ2 295 aa3.83□□□□□ -1.8
NCSTN-213ENST00000491332 COPS3Q9UNS2 423 aa3.83□□□□□ -1.8
NCSTN-213ENST00000491332 MAGI1Q96QZ7 1491 aaPredicted RBP3.83□□□□□ -1.8
NCSTN-213ENST00000491332 TOPBP1Q92547 1522 aa3.83□□□□□ -1.8
NCSTN-213ENST00000491332 SH3TC1Q8TE82 1336 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 IGHV1OR21-1A0A087WYE8 117 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 HELTA6NFD8 242 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 EMC8O43402 210 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 ZNF780AO75290 641 aaPredicted RBP3.82□□□□□ -1.8
NCSTN-213ENST00000491332 SNAPINO95295 136 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 UGT1A5P35504 534 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 RBMXP38159 391 aaKnown RBP3.82□□□□□ -1.8
NCSTN-213ENST00000491332 KLK7P49862 253 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 CRYBB1P53674 252 aaPredicted RBP3.82□□□□□ -1.8
NCSTN-213ENST00000491332 PKNOX1P55347 436 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 GNB2P62879 340 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 CSNK1G2P78368 415 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 VGLL4Q14135 290 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 IL17AQ16552 155 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 DUSP7Q16829 419 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 CEP55Q53EZ4 464 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 DMRTC1Q5HYR2 192 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 C1orf146Q5VVC0 180 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 OTPQ5XKR4 325 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 C11orf71Q6IPW1 123 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 KRTAP5-11Q6L8G4 156 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 GDPD3Q7L5L3 318 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 EFL1Q7Z2Z2 1120 aaKnown RBP3.82□□□□□ -1.8
NCSTN-213ENST00000491332 DHDDSQ86SQ9 333 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 CCDC65Q8IXS2 484 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 FTMTQ8N4E7 242 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 FGF11Q92914 225 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 PAGE5Q96GU1 130 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 TIMD4Q96H15 378 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 SEC22AQ96IW7 307 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 IMMP1LQ96LU5 166 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 SUDS3Q9H7L9 328 aaPredicted RBP3.82□□□□□ -1.8
NCSTN-213ENST00000491332 FOLH1BQ9HBA9 442 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 MCCC2Q9HCC0 563 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 POLE4Q9NR33 117 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 TREM2Q9NZC2 230 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 V9GY05 133 aa3.82□□□□□ -1.8
NCSTN-213ENST00000491332 CLASP1Q7Z460 1538 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 ZNF608Q9ULD9 1512 aaPredicted RBP3.81□□□□□ -1.8
NCSTN-213ENST00000491332 IGHV3OR16-13A0A075B7E8 117 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 SNTNA6NMZ2 147 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 GFYI3L273 518 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 OPN1MWP04001 364 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 ZNF853P0CG23 659 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 DUX4L4P0CJ87 422 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 OPN1MW2P0DN77 364 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 OPN1MW3P0DN78 364 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 ELK1P19419 428 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 FUT3P21217 361 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 ATP6V1B2P21281 511 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 GNA11P29992 359 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 CCR1P32246 355 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 SHMT2P34897 504 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 RFC4P35249 363 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 DDOSTP39656 456 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 CEBPDP49716 269 aaPredicted RBP3.81□□□□□ -1.8
NCSTN-213ENST00000491332 ATP1B3P54709 279 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 APOC4P55056 127 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 TNFRSF17Q02223 184 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 ASPHQ12797 758 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 BCL7AQ4VC05 210 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 OR52E8Q6IFG1 317 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 PGAP1Q75T13 922 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 PRSS41Q7RTY9 318 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 RDH10Q8IZV5 341 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 C6orf223Q8N319 242 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 OR4K14Q8NGD5 310 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 BRSK1Q8TDC3 778 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 DNAJA4Q8WW22 397 aaPredicted RBP3.81□□□□□ -1.8
NCSTN-213ENST00000491332 ZIM3Q96PE6 472 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 NPY6RQ99463 290 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 ZBTB18Q99592 522 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 COPS8Q99627 209 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 SELENOIQ9C0D9 397 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 RBKSQ9H477 322 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 REEP4Q9H6H4 257 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 FN3KRPQ9HA64 309 aa3.81□□□□□ -1.8
NCSTN-213ENST00000491332 PDFQ9HBH1 243 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms