RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 NID1P14543 1247 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 ENPP1P22413 925 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 RYKP34925 604 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 IDUAP35475 653 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 PGM1P36871 562 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 CLK1P49759 484 aaKnown RBP9.2□□□□□ -0.94
TTC28-207ENST00000490475 CCR4P51679 360 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 PLAURQ03405 335 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 SKP2Q13309 424 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 NFYCQ13952 458 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 SELPLGQ14242 412 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 CAPRIN1Q14444 709 aaKnown RBP9.2□□□□□ -0.94
TTC28-207ENST00000490475 ADRM1Q16186 407 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 NCMAPQ5T1S8 102 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 MTDHQ86UE4 582 aaKnown RBP9.2□□□□□ -0.94
TTC28-207ENST00000490475 VRK2Q86Y07 508 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 TUSC5Q8IXB3 177 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 ABHD3Q8WU67 409 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 IGFBPL1Q8WX77 278 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 CNOT9Q92600 299 aaKnown RBP9.2□□□□□ -0.94
TTC28-207ENST00000490475 AKAP1Q92667 903 aaKnown RBP eCLIP9.2□□□□□ -0.94
TTC28-207ENST00000490475 S100PBPQ96BU1 408 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 LRRC37BQ96QE4 947 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 CGREF1Q99674 301 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 SMR3AQ99954 134 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 GRIP2Q9C0E4 1043 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 RAD21L1Q9H4I0 556 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 ALG2Q9H553 416 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 BARX1Q9HBU1 254 aaPredicted RBP9.2□□□□□ -0.94
TTC28-207ENST00000490475 A4GALTQ9NPC4 353 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.2□□□□□ -0.94
TTC28-207ENST00000490475 RLIMQ9NVW2 624 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 THUMPD1Q9NXG2 353 aaKnown RBP9.2□□□□□ -0.94
TTC28-207ENST00000490475 SLC35A3Q9Y2D2 325 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 PRR14LQ5THK1 2151 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 A0A0G2JPF8 293 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 TMEM247A6NEH6 219 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 EVPLLA8MZ36 301 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 HNRNPCL2B2RXH8 293 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 HNRNPCL3B7ZW38 293 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 GPR171O14626 319 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 CYTIPO60759 359 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 DNAJA2O60884 412 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 ADAM11O75078 769 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 NTN1O95631 604 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 DBIP07108 87 aaKnown RBP9.19□□□□□ -0.94
TTC28-207ENST00000490475 HNRNPCL4P0DMR1 293 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 BMP2P12643 396 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 IL7RP16871 459 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 GPX2P18283 190 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 RPS4Y1P22090 263 aaKnown RBP9.19□□□□□ -0.94
TTC28-207ENST00000490475 PPIBP23284 216 aaKnown RBP9.19□□□□□ -0.94
TTC28-207ENST00000490475 APOBEC1P41238 236 aaKnown RBP9.19□□□□□ -0.94
TTC28-207ENST00000490475 OR3A2P47893 321 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 MAP2K6P52564 334 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 CRISP3P54108 245 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 MTPNP58546 118 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 RASGEF1BQ0VAM2 473 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 FADDQ13158 208 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 PDK3Q15120 406 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 QPRTQ15274 297 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 TIMM23BQ5SRD1 257 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 C22orf34Q6ZV56 151 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 Q71RC1 249 aaPredicted RBP9.19□□□□□ -0.94
TTC28-207ENST00000490475 GALNT5Q7Z7M9 940 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 LSRQ86X29 649 aaPredicted RBP9.19□□□□□ -0.94
TTC28-207ENST00000490475 SNX32Q86XE0 403 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 CLIP4Q8N3C7 705 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 POU5F2Q8N7G0 328 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 ATP6V1C2Q8NEY4 427 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 OR52P1PQ8NH57 321 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 NFKBIDQ8NI38 313 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 PMM1Q92871 262 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 CPPED1Q9BRF8 314 aaPredicted RBP9.19□□□□□ -0.94
TTC28-207ENST00000490475 RSPO3Q9BXY4 272 aaPredicted RBP9.19□□□□□ -0.94
TTC28-207ENST00000490475 SRXN1Q9BYN0 137 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 COQ10BQ9H8M1 238 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 CALML5Q9NZT1 146 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 MGAT4BQ9UQ53 548 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 LAMP3Q9UQV4 416 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 GMEB1Q9Y692 573 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 CADP27708 2225 aa9.19□□□□□ -0.94
TTC28-207ENST00000490475 C5orf58C9J3I9 102 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 SULT2B1O00204 365 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 SMAD7O15105 426 aaKnown RBP9.18□□□□□ -0.94
TTC28-207ENST00000490475 CCDC22O60826 627 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 PGM3O95394 542 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 ADAP00813 363 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 TP53P04637 393 aaPredicted RBP9.18□□□□□ -0.94
TTC28-207ENST00000490475 ARAFP10398 606 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 SHC1P29353 583 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 HTR3AP46098 478 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 SESN3P58005 492 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 CDK6Q00534 326 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 CYLC2Q14093 348 aaPredicted RBP9.18□□□□□ -0.94
TTC28-207ENST00000490475 GNA13Q14344 377 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 TAB1Q15750 504 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 NRF1Q16656 503 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 MMEL1Q495T6 779 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 ZNF672Q499Z4 452 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms