RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 ADAMDEC1O15204 470 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 FMO6PO60774 539 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 RASAL1O95294 804 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 EPPINO95925 133 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 IGKV1D-16P01601 117 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 MT-ND1P03886 318 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 NGFRP08138 427 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 IL7RP16871 459 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 NAGAP17050 411 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 TBXA2RP21731 343 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 F8A1P23610 371 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 PEX2P28328 305 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 CCKARP32238 428 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 DCTP40126 519 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 OR1E2P47887 323 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 ARHGDIAP52565 204 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 PNLIPRP2P54317 469 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 SMIM11AP58511 58 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 HOXA4Q00056 320 aaPredicted RBP4.11□□□□□ -1.75
RBM39-235ENST00000490354 DNASE1L3Q13609 305 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 GPR68Q15743 365 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 MAPK14Q16539 360 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 NRF1Q16656 503 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 LIN52Q52LA3 116 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 KLHL26Q53HC5 615 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 EIPR1Q53HC9 387 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 CCNJQ5T5M9 372 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 RNF220Q5VTB9 566 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 LPCAT4Q643R3 524 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 OR2T5Q6IEZ7 315 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 SHQ1Q6PI26 577 aaKnown RBP4.11□□□□□ -1.75
RBM39-235ENST00000490354 ZBTB49Q6ZSB9 765 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 OLIG3Q7RTU3 272 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 PPP1R32Q7Z5V6 425 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 DTX2Q86UW9 622 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 COMTD1Q86VU5 262 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 CYP4Z1Q86W10 505 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 VRK2Q86Y07 508 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 HIPK1Q86Z02 1210 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 RBM45Q8IUH3 476 aaKnown RBP4.11□□□□□ -1.75
RBM39-235ENST00000490354 GRAMD2AQ8IUY3 354 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 SLC34A3Q8N130 599 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 CLIP4Q8N3C7 705 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 SVOPLQ8N434 492 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 CBR4Q8N4T8 237 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 SLC15A4Q8N697 577 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 NANOGP1Q8N7R0 232 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 NRACQ8N912 160 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 OR11G2Q8NGC1 345 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 OR6T1Q8NGN1 323 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 OR2T29Q8NH02 315 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 OR4C3Q8NH37 302 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 OR5K1Q8NHB7 308 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 PRSS3P2Q8NHM4 247 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 PHF10Q8WUB8 498 aaKnown RBP4.11□□□□□ -1.75
RBM39-235ENST00000490354 CT55Q8WUE5 264 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 NR4A3Q92570 626 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 TMBIM1Q969X1 311 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 EME1Q96AY2 570 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 C8orf44Q96CB5 159 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 VPS50Q96JG6 964 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 EPYCQ99645 322 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 ZNF184Q99676 751 aaPredicted RBP4.11□□□□□ -1.75
RBM39-235ENST00000490354 SLC29A1Q99808 456 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 WFDC6Q9BQY6 131 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 MESP1Q9BRJ9 268 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 C9orf16Q9BUW7 83 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 DEFB126Q9BYW3 111 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 POLR2J2Q9GZM3 115 aaKnown RBP4.11□□□□□ -1.75
RBM39-235ENST00000490354 POLR2J3Q9H1A7 115 aaKnown RBP4.11□□□□□ -1.75
RBM39-235ENST00000490354 NXF5Q9H1B4 397 aaKnown RBP4.11□□□□□ -1.75
RBM39-235ENST00000490354 VCXQ9H320 206 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 COQ10BQ9H8M1 238 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 REEP1Q9H902 201 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 UBQLN4Q9NRR5 601 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.11□□□□□ -1.75
RBM39-235ENST00000490354 USE1Q9NZ43 259 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 ACAD8Q9UKU7 415 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 ABCG2Q9UNQ0 655 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 ZNF443Q9Y2A4 671 aaPredicted RBP4.11□□□□□ -1.75
RBM39-235ENST00000490354 SAMHD1Q9Y3Z3 626 aaKnown RBP4.11□□□□□ -1.75
RBM39-235ENST00000490354 FAM32AQ9Y421 112 aaKnown RBP4.11□□□□□ -1.75
RBM39-235ENST00000490354 DTNAQ9Y4J8 743 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 THADAQ6YHU6 1953 aa4.11□□□□□ -1.75
RBM39-235ENST00000490354 RIF1Q5UIP0 2472 aaKnown RBP4.11□□□□□ -1.75
RBM39-235ENST00000490354 COL5A1P20908 1838 aaPredicted RBP4.1□□□□□ -1.75
RBM39-235ENST00000490354 IGKV2D-30A0A075B6S6 120 aa4.1□□□□□ -1.75
RBM39-235ENST00000490354 NSG1A0A0A6YYJ2 146 aa4.1□□□□□ -1.75
RBM39-235ENST00000490354 TRBV11-1A0A0K0K1C0 115 aa4.1□□□□□ -1.75
RBM39-235ENST00000490354 A0A1W2PQD3 144 aa4.1□□□□□ -1.75
RBM39-235ENST00000490354 A0A1W2PRQ8 180 aa4.1□□□□□ -1.75
RBM39-235ENST00000490354 ARRDC5A6NEK1 342 aa4.1□□□□□ -1.75
RBM39-235ENST00000490354 SERINC4A6NH21 518 aa4.1□□□□□ -1.75
RBM39-235ENST00000490354 OR6C70A6NIJ9 312 aa4.1□□□□□ -1.75
RBM39-235ENST00000490354 SAC3D1A6NKF1 404 aa4.1□□□□□ -1.75
RBM39-235ENST00000490354 ALG1L2C9J202 215 aa4.1□□□□□ -1.75
RBM39-235ENST00000490354 H3BNH8 94 aa4.1□□□□□ -1.75
RBM39-235ENST00000490354 M0R3H8 397 aa4.1□□□□□ -1.75
RBM39-235ENST00000490354 PDLIM1O00151 329 aa4.1□□□□□ -1.75
RBM39-235ENST00000490354 TNFRSF11BO00300 401 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms