RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 IQCF5A8MTL0 148 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 A8MUA0 341 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 ANKRD66B4E2M5 251 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 B9A039 149 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 C5orf67F2Z3F1 127 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 F5H5T6 163 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 H3BUI4 141 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 GFYI3L273 518 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 J3QRE1 110 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 DNASE2O00115 360 aaPredicted RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 GABRPO00591 440 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 TSPAN4O14817 238 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 MGST3O14880 152 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 CTDSPLO15194 276 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 CHST10O43529 356 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 LANCL1O43813 399 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 SLC28A2O43868 658 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 GALR3O60755 368 aaPredicted RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 TBX19O60806 448 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 C1QL1O75973 258 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 SOX30O94993 753 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 OR2A4O95047 310 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 SNAPINO95295 136 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 CD160O95971 181 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 PAHP00439 452 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 EGFP01133 1207 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 TRBC1P01850 177 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 OPN1SWP03999 348 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 TCRBP04435 133 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 SERPIND1P05546 499 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 CTSLP07711 333 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 GIPP09681 153 aaPredicted RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 MPC1LP0DKB6 136 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 NR2F6P10588 404 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 ETFAP13804 333 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 TYRP14679 529 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 CPN1P15169 458 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 CD22P20273 847 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 ITGALP20701 1170 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 DNASE1P24855 282 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 DDX6P26196 483 aaKnown RBP eCLIP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 ELAVL4P26378 380 aaKnown RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 LCN1P31025 176 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 GDI1P31150 447 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 TIA1P31483 386 aaKnown RBP eCLIP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 RPL3P39023 403 aaKnown RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 GSTM5P46439 218 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 KCNJ5P48544 419 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 PITPNBP48739 271 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 CCT3P49368 545 aaKnown RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 XKP51811 444 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 LIM2P55344 173 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 CTBP2P56545 445 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 SMIM11AP58511 58 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 RAB14P61106 215 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 RAP2BP61225 183 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 AP1S1P61966 158 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 RPS7P62081 194 aaKnown RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 CDK6Q00534 326 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 CDK5Q00535 292 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 FGL1Q08830 312 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 DMWDQ09019 674 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 ELAVL2Q12926 359 aaKnown RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 RPA4Q13156 261 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 SRSF5Q13243 272 aaKnown RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 BTN1A1Q13410 526 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 DYRK1AQ13627 763 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 KLF9Q13886 244 aaPredicted RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 FGFBP1Q14512 234 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 OPCMLQ14982 345 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 UBXN2BQ14CS0 331 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 STK11Q15831 433 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 ETFDHQ16134 617 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 SNAPC1Q16533 368 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 NTRK2Q16620 822 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 CDKN3Q16667 212 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 MPEG1Q2M385 716 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 C3orf36Q3SXR2 165 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 ENTPD8Q5MY95 495 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 HECTD3Q5T447 861 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 CPTPQ5TA50 214 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 SLC22A10Q63ZE4 541 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 PTRHD1Q6GMV3 140 aaKnown RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 RAET1GQ6H3X3 334 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 GRHL2Q6ISB3 625 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 PYHIN1Q6K0P9 492 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 TRIM40Q6P9F5 258 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 NCEH1Q6PIU2 408 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 SMARCD3Q6STE5 483 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 FAM198BQ6UWH4 519 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 CASP12Q6UXS9 341 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 TMIGD1Q6UXZ0 262 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 SLC36A4Q6YBV0 504 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 ZNF783Q6ZMS7 281 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 CFAP77Q6ZQR2 320 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 ZNF621Q6ZSS3 439 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 CHST9Q7L1S5 443 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 TSPAN33Q86UF1 283 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 LRRTM4Q86VH4 590 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 SERPINA9Q86WD7 417 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms