RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 SCDO00767 359 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 EEF1E1O43324 174 aaKnown RBP9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 DENRO43583 198 aaKnown RBP9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 DEAF1O75398 565 aaPredicted RBP9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 DIRAS1O95057 198 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 CSTAP01040 98 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 UBL4AP11441 157 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 TCEA1P23193 301 aaKnown RBP9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 KIR2DL3P43628 341 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 EPS8Q12929 822 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 OR2A2Q6IF42 318 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 ZBTB49Q6ZSB9 765 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 KIF18BQ86Y91 864 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 ZDHHC21Q8IVQ6 265 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 PHOSPHO1Q8TCT1 267 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 LZICQ8WZA0 190 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 PROX1Q92786 737 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 DHRS1Q96LJ7 313 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 PKP2Q99959 881 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 CHID1Q9BWS9 393 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 OSBPL10Q9BXB5 764 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 LAT2Q9GZY6 243 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 PIGMQ9H3S5 423 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 NTN4Q9HB63 628 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 MAN2C1Q9NTJ4 1040 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 JKAMPQ9P055 326 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 A4GNTQ9UNA3 340 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 ZNF232Q9UNY5 417 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 SLC35A3Q9Y2D2 325 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 CARD8Q9Y2G2 431 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 ENPP4Q9Y6X5 453 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 CSMD1Q96PZ7 3565 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 FREM3P0C091 2139 aa9.49□□□□□ -0.89
SCAMP4-208ENST00000489554 INTS1Q8N201 2190 aaKnown RBP9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 ARHGAP21Q5T5U3 1957 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 LRBAP50851 2863 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 OR2M5A3KFT3 312 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 ETV2O00321 342 aaPredicted RBP9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 ZNF264O43296 627 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 EIF4E2O60573 245 aaKnown RBP9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 TIPRLO75663 272 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 FABP3P05413 133 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 CRHP06850 196 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 UBTFL6P0CB48 400 aaPredicted RBP9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 ZNF17P17021 662 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 PEX2P28328 305 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 KRTAP10-9P60411 292 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 RPS3AP61247 264 aaKnown RBP9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 SORDQ00796 357 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 TOMM34Q15785 309 aaPredicted RBP9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 ZSWIM7Q19AV6 140 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 TMEM44Q2T9K0 475 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 LPCAT4Q643R3 524 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 PPP4R4Q6NUP7 873 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 P4HA3Q7Z4N8 544 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 CDH24Q86UP0 819 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 TMEM200AQ86VY9 491 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 UBQLNLQ8IYU4 475 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 FAM222BQ8WU58 562 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 LRTOMTQ8WZ04 291 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 ZBTB8AQ96BR9 441 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 INTS12Q96CB8 462 aaKnown RBP9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 ZNF570Q96NI8 536 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 ZNF300Q96RE9 604 aaPredicted RBP9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 NPAS1Q99742 590 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 FUZQ9BT04 418 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 ZNF337Q9Y3M9 751 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 AP4B1Q9Y6B7 739 aa9.48□□□□□ -0.89
SCAMP4-208ENST00000489554 C7orf72A4D263 438 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 SLC22A20A6NK97 555 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 H3BML4 177 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 FAAHO00519 579 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 FMO6PO60774 539 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 NTN1O95631 604 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 IFNW1P05000 195 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 YAP1P46937 504 aaKnown RBP9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 LIMS1P48059 325 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 P2RX1P51575 399 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 ZNF41P51814 821 aaPredicted RBP9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 ARHGDIAP52565 204 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 AGFG1P52594 562 aaKnown RBP9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 RGS8P57771 180 aaPredicted RBP9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 FOXF2Q12947 444 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 ATP6AP1Q15904 470 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 LRRC36Q1X8D7 754 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 TMEM179BQ7Z7N9 219 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 GCNT2Q8N0V5 402 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 GTPBP8Q8N3Z3 284 aaPredicted RBP9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 LSMEM1Q8N8F7 131 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 TOR1AIP2Q8NFQ8 470 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 OR5M1Q8NGP8 315 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 GPR119Q8TDV5 335 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 SH3YL1Q96HL8 342 aaPredicted RBP9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 EVA1AQ9H8M9 152 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 CRIM1Q9NZV1 1036 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 TESQ9UGI8 421 aaKnown RBP9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 VDAC3Q9Y277 283 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 SLC9A8Q9Y2E8 581 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 ZNF175Q9Y473 711 aa9.47□□□□□ -0.89
SCAMP4-208ENST00000489554 A0A0B4J2E0 115 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms