RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 LIPT2A6NK58 231 aa22.08■■□□□ 1.13
HMGN1-217ENST00000489072 GPR171O14626 319 aa22.08■■□□□ 1.13
HMGN1-217ENST00000489072 EIF1BO60739 113 aaKnown RBP22.08■■□□□ 1.13
HMGN1-217ENST00000489072 CNOT4O95628 575 aaKnown RBP22.08■■□□□ 1.13
HMGN1-217ENST00000489072 CD99P14209 185 aa22.08■■□□□ 1.13
HMGN1-217ENST00000489072 ADSLP30566 484 aaPredicted RBP22.08■■□□□ 1.13
HMGN1-217ENST00000489072 IDUAP35475 653 aa22.08■■□□□ 1.13
HMGN1-217ENST00000489072 NR1H2P55055 460 aa22.08■■□□□ 1.13
HMGN1-217ENST00000489072 CEACAM7Q14002 265 aa22.08■■□□□ 1.13
HMGN1-217ENST00000489072 ADRM1Q16186 407 aa22.08■■□□□ 1.13
HMGN1-217ENST00000489072 RUNDC3AQ59EK9 446 aa22.08■■□□□ 1.13
HMGN1-217ENST00000489072 REEP3Q6NUK4 255 aa22.08■■□□□ 1.13
HMGN1-217ENST00000489072 RETREG3Q86VR2 466 aa22.08■■□□□ 1.13
HMGN1-217ENST00000489072 KRTAP1-3Q8IUG1 177 aa22.08■■□□□ 1.13
HMGN1-217ENST00000489072 HSD17B8Q92506 261 aa22.08■■□□□ 1.13
HMGN1-217ENST00000489072 NAA11Q9BSU3 229 aaPredicted RBP22.08■■□□□ 1.13
HMGN1-217ENST00000489072 LEF1Q9UJU2 399 aaPredicted RBP22.08■■□□□ 1.13
HMGN1-217ENST00000489072 TRIM33Q9UPN9 1127 aa22.08■■□□□ 1.13
HMGN1-217ENST00000489072 TMEM229AB2RXF0 380 aa22.07■■□□□ 1.12
HMGN1-217ENST00000489072 PRKAR1BP31321 381 aa22.07■■□□□ 1.12
HMGN1-217ENST00000489072 FOXD4Q12950 439 aaPredicted RBP22.07■■□□□ 1.12
HMGN1-217ENST00000489072 SLC17A1Q14916 467 aa22.07■■□□□ 1.12
HMGN1-217ENST00000489072 OR7A5Q15622 319 aa22.07■■□□□ 1.12
HMGN1-217ENST00000489072 FBXW9Q5XUX1 488 aa22.07■■□□□ 1.12
HMGN1-217ENST00000489072 PAQR6Q6TCH4 344 aa22.07■■□□□ 1.12
HMGN1-217ENST00000489072 ATG4DQ86TL0 474 aaPredicted RBP22.07■■□□□ 1.12
HMGN1-217ENST00000489072 DPP10Q8N608 796 aa22.07■■□□□ 1.12
HMGN1-217ENST00000489072 ZNF433Q8N7K0 673 aaPredicted RBP22.07■■□□□ 1.12
HMGN1-217ENST00000489072 WFDC11Q8NEX6 87 aa22.07■■□□□ 1.12
HMGN1-217ENST00000489072 SLC35B4Q969S0 331 aa22.07■■□□□ 1.12
HMGN1-217ENST00000489072 APH1AQ96BI3 265 aa22.07■■□□□ 1.12
HMGN1-217ENST00000489072 SIKE1Q9BRV8 207 aa22.07■■□□□ 1.12
HMGN1-217ENST00000489072 TMEM38AQ9H6F2 299 aa22.07■■□□□ 1.12
HMGN1-217ENST00000489072 CORO2BQ9UQ03 480 aa22.07■■□□□ 1.12
HMGN1-217ENST00000489072 FLVCR1Q9Y5Y0 555 aa22.07■■□□□ 1.12
HMGN1-217ENST00000489072 NF1P21359 2839 aa22.07■■□□□ 1.12
HMGN1-217ENST00000489072 ZFHX3Q15911 3703 aa22.06■■□□□ 1.12
HMGN1-217ENST00000489072 USF3Q68DE3 2245 aa22.06■■□□□ 1.12
HMGN1-217ENST00000489072 A8MVM7 634 aa22.06■■□□□ 1.12
HMGN1-217ENST00000489072 EVPLLA8MZ36 301 aa22.06■■□□□ 1.12
HMGN1-217ENST00000489072 TPST1O60507 370 aa22.06■■□□□ 1.12
HMGN1-217ENST00000489072 NPIPB7O75200 414 aa22.06■■□□□ 1.12
HMGN1-217ENST00000489072 GPIP06744 558 aa22.06■■□□□ 1.12
HMGN1-217ENST00000489072 HOXC12P31275 282 aa22.06■■□□□ 1.12
HMGN1-217ENST00000489072 SCARB2Q14108 478 aa22.06■■□□□ 1.12
HMGN1-217ENST00000489072 DHRS4L2Q6PKH6 230 aa22.06■■□□□ 1.12
HMGN1-217ENST00000489072 C20orf204Q6ZNR8 217 aa22.06■■□□□ 1.12
HMGN1-217ENST00000489072 DHDDSQ86SQ9 333 aa22.06■■□□□ 1.12
HMGN1-217ENST00000489072 TMEM99Q8N816 258 aa22.06■■□□□ 1.12
HMGN1-217ENST00000489072 CCL19Q99731 98 aa22.06■■□□□ 1.12
HMGN1-217ENST00000489072 PIP5K1AQ99755 562 aa22.06■■□□□ 1.12
HMGN1-217ENST00000489072 NDUFAF1Q9Y375 327 aa22.06■■□□□ 1.12
HMGN1-217ENST00000489072 MRPL33O75394 65 aaKnown RBP22.05■■□□□ 1.12
HMGN1-217ENST00000489072 AKR7A3O95154 331 aa22.05■■□□□ 1.12
HMGN1-217ENST00000489072 SELPLGQ14242 412 aa22.05■■□□□ 1.12
HMGN1-217ENST00000489072 CAPRIN1Q14444 709 aaKnown RBP22.05■■□□□ 1.12
HMGN1-217ENST00000489072 STK11Q15831 433 aa22.05■■□□□ 1.12
HMGN1-217ENST00000489072 GLIPR1L2Q4G1C9 344 aa22.05■■□□□ 1.12
HMGN1-217ENST00000489072 NCMAPQ5T1S8 102 aa22.05■■□□□ 1.12
HMGN1-217ENST00000489072 OTUD3Q5T2D3 398 aaPredicted RBP22.05■■□□□ 1.12
HMGN1-217ENST00000489072 C1orf140Q5VVS0 124 aa22.05■■□□□ 1.12
HMGN1-217ENST00000489072 UBE2J2Q8N2K1 259 aa22.05■■□□□ 1.12
HMGN1-217ENST00000489072 PIGTQ969N2 578 aa22.05■■□□□ 1.12
HMGN1-217ENST00000489072 USB1Q9BQ65 265 aaKnown RBP22.05■■□□□ 1.12
HMGN1-217ENST00000489072 TMEM120AQ9BXJ8 343 aa22.05■■□□□ 1.12
HMGN1-217ENST00000489072 AQP7P3A6NL99 342 aa22.04■■□□□ 1.12
HMGN1-217ENST00000489072 ANGPT2O15123 496 aa22.04■■□□□ 1.12
HMGN1-217ENST00000489072 SLC6A2P23975 617 aa22.04■■□□□ 1.12
HMGN1-217ENST00000489072 HTR2AP28223 471 aa22.04■■□□□ 1.12
HMGN1-217ENST00000489072 P2RY4P51582 365 aa22.04■■□□□ 1.12
HMGN1-217ENST00000489072 FOXG1P55316 489 aaPredicted RBP22.04■■□□□ 1.12
HMGN1-217ENST00000489072 CASP12Q6UXS9 341 aa22.04■■□□□ 1.12
HMGN1-217ENST00000489072 KRT73Q86Y46 540 aa22.04■■□□□ 1.12
HMGN1-217ENST00000489072 PTOV1Q86YD1 416 aa22.04■■□□□ 1.12
HMGN1-217ENST00000489072 IGFBPL1Q8WX77 278 aa22.04■■□□□ 1.12
HMGN1-217ENST00000489072 ANKRD27Q96NW4 1050 aa22.04■■□□□ 1.12
HMGN1-217ENST00000489072 CGREF1Q99674 301 aa22.04■■□□□ 1.12
HMGN1-217ENST00000489072 DLL4Q9NR61 685 aa22.04■■□□□ 1.12
HMGN1-217ENST00000489072 MALT1Q9UDY8 824 aa22.04■■□□□ 1.12
HMGN1-217ENST00000489072 SLC9A8Q9Y2E8 581 aa22.04■■□□□ 1.12
HMGN1-217ENST00000489072 SMPD2O60906 423 aa22.03■■□□□ 1.12
HMGN1-217ENST00000489072 GGT1P19440 569 aa22.03■■□□□ 1.12
HMGN1-217ENST00000489072 AQP1P29972 269 aa22.03■■□□□ 1.12
HMGN1-217ENST00000489072 MTPNP58546 118 aa22.03■■□□□ 1.12
HMGN1-217ENST00000489072 NKX6-1P78426 367 aaPredicted RBP22.03■■□□□ 1.12
HMGN1-217ENST00000489072 METTL21CQ5VZV1 264 aa22.03■■□□□ 1.12
HMGN1-217ENST00000489072 CGB2Q6NT52 195 aa22.03■■□□□ 1.12
HMGN1-217ENST00000489072 ZIC4Q8N9L1 334 aa22.03■■□□□ 1.12
HMGN1-217ENST00000489072 OR52E4Q8NGH9 312 aa22.03■■□□□ 1.12
HMGN1-217ENST00000489072 LILRB1Q8NHL6 650 aaPredicted RBP22.03■■□□□ 1.12
HMGN1-217ENST00000489072 STK35Q8TDR2 534 aa22.03■■□□□ 1.12
HMGN1-217ENST00000489072 TSPEARQ8WU66 669 aa22.03■■□□□ 1.12
HMGN1-217ENST00000489072 SPATA5L1Q9BVQ7 753 aa22.03■■□□□ 1.12
HMGN1-217ENST00000489072 PRR14Q9BWN1 585 aa22.03■■□□□ 1.12
HMGN1-217ENST00000489072 FGFR1OP2Q9NVK5 253 aa22.03■■□□□ 1.12
HMGN1-217ENST00000489072 ADPRHL2Q9NX46 363 aa22.03■■□□□ 1.12
HMGN1-217ENST00000489072 PLCE1Q9P212 2302 aa22.03■■□□□ 1.12
HMGN1-217ENST00000489072 DPRXA6NFQ7 191 aa22.02■■□□□ 1.12
HMGN1-217ENST00000489072 HS3ST1O14792 307 aa22.02■■□□□ 1.12
HMGN1-217ENST00000489072 RAD51DO75771 328 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms