RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 WDR60Q8WVS4 1066 aa16.15■□□□□ 0.18
HDAC6-231ENST00000488905 TRIM44Q96DX7 344 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-231ENST00000488905 TNFRSF13CQ96RJ3 184 aa16.15■□□□□ 0.18
HDAC6-231ENST00000488905 NAA11Q9BSU3 229 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-231ENST00000488905 TMEM109Q9BVC6 243 aa16.15■□□□□ 0.18
HDAC6-231ENST00000488905 C1QTNF6Q9BXI9 259 aa16.15■□□□□ 0.18
HDAC6-231ENST00000488905 SLC17A5Q9NRA2 495 aa16.15■□□□□ 0.18
HDAC6-231ENST00000488905 SLC7A10Q9NS82 523 aa16.15■□□□□ 0.18
HDAC6-231ENST00000488905 PARPBPQ9NWS1 579 aa16.15■□□□□ 0.18
HDAC6-231ENST00000488905 BTNL2Q9UIR0 455 aa16.15■□□□□ 0.18
HDAC6-231ENST00000488905 HAO1Q9UJM8 370 aa16.15■□□□□ 0.18
HDAC6-231ENST00000488905 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-231ENST00000488905 ZC3H12DA2A288 527 aaKnown RBP16.14■□□□□ 0.17
HDAC6-231ENST00000488905 FAAHO00519 579 aa16.14■□□□□ 0.17
HDAC6-231ENST00000488905 TACR3P29371 465 aa16.14■□□□□ 0.17
HDAC6-231ENST00000488905 S100A3P33764 101 aa16.14■□□□□ 0.17
HDAC6-231ENST00000488905 SLC1A3P43003 542 aa16.14■□□□□ 0.17
HDAC6-231ENST00000488905 SLC1A6P48664 564 aa16.14■□□□□ 0.17
HDAC6-231ENST00000488905 VLDLRP98155 873 aa16.14■□□□□ 0.17
HDAC6-231ENST00000488905 EPS8Q12929 822 aa16.14■□□□□ 0.17
HDAC6-231ENST00000488905 KRT71Q3SY84 523 aa16.14■□□□□ 0.17
HDAC6-231ENST00000488905 TSPO2Q5TGU0 170 aa16.14■□□□□ 0.17
HDAC6-231ENST00000488905 PAQR6Q6TCH4 344 aa16.14■□□□□ 0.17
HDAC6-231ENST00000488905 LRRC74BQ6ZQY2 392 aa16.14■□□□□ 0.17
HDAC6-231ENST00000488905 PHC2Q8IXK0 858 aa16.14■□□□□ 0.17
HDAC6-231ENST00000488905 TRIML2Q8N7C3 387 aa16.14■□□□□ 0.17
HDAC6-231ENST00000488905 FAM168AQ92567 244 aa16.14■□□□□ 0.17
HDAC6-231ENST00000488905 PMM1Q92871 262 aa16.14■□□□□ 0.17
HDAC6-231ENST00000488905 TEX37Q96LM6 180 aa16.14■□□□□ 0.17
HDAC6-231ENST00000488905 MANSC1Q9H8J5 431 aa16.14■□□□□ 0.17
HDAC6-231ENST00000488905 FKRPQ9H9S5 495 aa16.14■□□□□ 0.17
HDAC6-231ENST00000488905 MEAF6Q9HAF1 191 aa16.14■□□□□ 0.17
HDAC6-231ENST00000488905 CDC42EP3Q9UKI2 254 aa16.14■□□□□ 0.17
HDAC6-231ENST00000488905 ATP23Q9Y6H3 246 aa16.14■□□□□ 0.17
HDAC6-231ENST00000488905 CCDC154A6NI56 674 aa16.13■□□□□ 0.17
HDAC6-231ENST00000488905 TM9SF1O15321 606 aa16.13■□□□□ 0.17
HDAC6-231ENST00000488905 CSF3P09919 207 aa16.13■□□□□ 0.17
HDAC6-231ENST00000488905 ALDOCP09972 364 aaKnown RBP16.13■□□□□ 0.17
HDAC6-231ENST00000488905 UQCRBP14927 111 aa16.13■□□□□ 0.17
HDAC6-231ENST00000488905 MPGP29372 298 aa16.13■□□□□ 0.17
HDAC6-231ENST00000488905 ANXA11P50995 505 aaKnown RBP16.13■□□□□ 0.17
HDAC6-231ENST00000488905 MAP2K6P52564 334 aa16.13■□□□□ 0.17
HDAC6-231ENST00000488905 NME5P56597 212 aa16.13■□□□□ 0.17
HDAC6-231ENST00000488905 TXNL4AP83876 142 aaKnown RBP16.13■□□□□ 0.17
HDAC6-231ENST00000488905 TGFBR3Q03167 851 aa16.13■□□□□ 0.17
HDAC6-231ENST00000488905 GNA13Q14344 377 aa16.13■□□□□ 0.17
HDAC6-231ENST00000488905 MRPL2Q5T653 305 aaKnown RBP16.13■□□□□ 0.17
HDAC6-231ENST00000488905 OGFOD2Q6N063 350 aa16.13■□□□□ 0.17
HDAC6-231ENST00000488905 TMEM45BQ96B21 275 aa16.13■□□□□ 0.17
HDAC6-231ENST00000488905 PANX1Q96RD7 426 aa16.13■□□□□ 0.17
HDAC6-231ENST00000488905 SSU72Q9NP77 194 aaKnown RBP16.13■□□□□ 0.17
HDAC6-231ENST00000488905 CFAP73A6NFT4 308 aa16.12■□□□□ 0.17
HDAC6-231ENST00000488905 ATP6V1G2-DDX39BF2Z307 99 aa16.12■□□□□ 0.17
HDAC6-231ENST00000488905 RGS16O15492 202 aaPredicted RBP16.12■□□□□ 0.17
HDAC6-231ENST00000488905 FAM157CP0CG43 387 aa16.12■□□□□ 0.17
HDAC6-231ENST00000488905 BMP4P12644 408 aa16.12■□□□□ 0.17
HDAC6-231ENST00000488905 IL7RP16871 459 aa16.12■□□□□ 0.17
HDAC6-231ENST00000488905 BGNP21810 368 aa16.12■□□□□ 0.17
HDAC6-231ENST00000488905 CDKN2CP42773 168 aa16.12■□□□□ 0.17
HDAC6-231ENST00000488905 UFM1P61960 85 aa16.12■□□□□ 0.17
HDAC6-231ENST00000488905 CHRNB3Q05901 458 aa16.12■□□□□ 0.17
HDAC6-231ENST00000488905 OTUD3Q5T2D3 398 aaPredicted RBP16.12■□□□□ 0.17
HDAC6-231ENST00000488905 C1QTNF12Q5T7M4 302 aa16.12■□□□□ 0.17
HDAC6-231ENST00000488905 KLHL24Q6TFL4 600 aa16.12■□□□□ 0.17
HDAC6-231ENST00000488905 C10orf105Q8TEF2 133 aa16.12■□□□□ 0.17
HDAC6-231ENST00000488905 AIG1Q9NVV5 245 aa16.12■□□□□ 0.17
HDAC6-231ENST00000488905 PGRP06401 933 aa16.11■□□□□ 0.17
HDAC6-231ENST00000488905 GPIP06744 558 aa16.11■□□□□ 0.17
HDAC6-231ENST00000488905 DBIP07108 87 aaKnown RBP16.11■□□□□ 0.17
HDAC6-231ENST00000488905 NR2F1P10589 423 aa16.11■□□□□ 0.17
HDAC6-231ENST00000488905 ZNF16P17020 682 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-231ENST00000488905 IL12AP29459 219 aa16.11■□□□□ 0.17
HDAC6-231ENST00000488905 APOBEC3AP31941 199 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-231ENST00000488905 EFNA4P52798 201 aa16.11■□□□□ 0.17
HDAC6-231ENST00000488905 COX20Q5RI15 118 aa16.11■□□□□ 0.17
HDAC6-231ENST00000488905 MREGQ8N565 214 aa16.11■□□□□ 0.17
HDAC6-231ENST00000488905 OR9K2Q8NGE7 335 aa16.11■□□□□ 0.17
HDAC6-231ENST00000488905 PNPT1Q8TCS8 783 aaKnown RBP16.11■□□□□ 0.17
HDAC6-231ENST00000488905 TMEM158Q8WZ71 300 aa16.11■□□□□ 0.17
HDAC6-231ENST00000488905 ZNF385AQ96PM9 386 aaKnown RBP16.11■□□□□ 0.17
HDAC6-231ENST00000488905 SF3B5Q9BWJ5 86 aaKnown RBP16.11■□□□□ 0.17
HDAC6-231ENST00000488905 ADAM19Q9H013 955 aa16.11■□□□□ 0.17
HDAC6-231ENST00000488905 MTHFD2LQ9H903 347 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-231ENST00000488905 TMEM160Q9NX00 188 aa16.11■□□□□ 0.17
HDAC6-231ENST00000488905 LIPT2A6NK58 231 aa16.1■□□□□ 0.17
HDAC6-231ENST00000488905 AQP7P3A6NL99 342 aa16.1■□□□□ 0.17
HDAC6-231ENST00000488905 AKR7A3O95154 331 aa16.1■□□□□ 0.17
HDAC6-231ENST00000488905 WNT11O96014 354 aa16.1■□□□□ 0.17
HDAC6-231ENST00000488905 PRPS1P60891 318 aa16.1■□□□□ 0.17
HDAC6-231ENST00000488905 LRRC74AQ0VAA2 488 aa16.1■□□□□ 0.17
HDAC6-231ENST00000488905 CEACAM7Q14002 265 aa16.1■□□□□ 0.17
HDAC6-231ENST00000488905 OR7A5Q15622 319 aa16.1■□□□□ 0.17
HDAC6-231ENST00000488905 WDR93Q6P2C0 686 aa16.1■□□□□ 0.17
HDAC6-231ENST00000488905 ZNF621Q6ZSS3 439 aa16.1■□□□□ 0.17
HDAC6-231ENST00000488905 AAED1Q7RTV5 226 aa16.1■□□□□ 0.17
HDAC6-231ENST00000488905 PEX5LQ8IYB4 626 aa16.1■□□□□ 0.17
HDAC6-231ENST00000488905 ZNF440Q8IYI8 595 aa16.1■□□□□ 0.17
HDAC6-231ENST00000488905 TMEM99Q8N816 258 aa16.1■□□□□ 0.17
HDAC6-231ENST00000488905 POMGNT2Q8NAT1 580 aa16.1■□□□□ 0.17
HDAC6-231ENST00000488905 NANOS1Q8WY41 292 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms