RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 ARMC12Q5T9G4 340 aa2.7□□□□□ -1.98
SSR1-209ENST00000488834 TMEM184AQ6ZMB5 413 aa2.7□□□□□ -1.98
SSR1-209ENST00000488834 LANCL3Q6ZV70 420 aa2.7□□□□□ -1.98
SSR1-209ENST00000488834 EFL1Q7Z2Z2 1120 aaKnown RBP2.7□□□□□ -1.98
SSR1-209ENST00000488834 LHFPL4Q7Z7J7 247 aa2.7□□□□□ -1.98
SSR1-209ENST00000488834 ZNF589Q86UQ0 364 aaPredicted RBP2.7□□□□□ -1.98
SSR1-209ENST00000488834 ALLCQ8N6M5 410 aa2.7□□□□□ -1.98
SSR1-209ENST00000488834 OR2T33Q8NG76 320 aa2.7□□□□□ -1.98
SSR1-209ENST00000488834 SUN5Q8TC36 379 aa2.7□□□□□ -1.98
SSR1-209ENST00000488834 SLC41A3Q96GZ6 507 aa2.7□□□□□ -1.98
SSR1-209ENST00000488834 C4orf36Q96KX1 117 aa2.7□□□□□ -1.98
SSR1-209ENST00000488834 ALG12Q9BV10 488 aa2.7□□□□□ -1.98
SSR1-209ENST00000488834 DHX33Q9H6R0 707 aaKnown RBP2.7□□□□□ -1.98
SSR1-209ENST00000488834 EXO5Q9H790 373 aa2.7□□□□□ -1.98
SSR1-209ENST00000488834 NANOGQ9H9S0 305 aa2.7□□□□□ -1.98
SSR1-209ENST00000488834 GPN2Q9H9Y4 310 aaPredicted RBP2.7□□□□□ -1.98
SSR1-209ENST00000488834 MRPS33Q9Y291 106 aaKnown RBP2.7□□□□□ -1.98
SSR1-209ENST00000488834 NOSIPQ9Y314 301 aaKnown RBP2.7□□□□□ -1.98
SSR1-209ENST00000488834 CARMIL1Q5VZK9 1371 aa2.7□□□□□ -1.98
SSR1-209ENST00000488834 TDRD6O60522 2096 aaKnown RBP2.7□□□□□ -1.98
SSR1-209ENST00000488834 SF3B1O75533 1304 aaKnown RBP eCLIP2.69□□□□□ -1.982e-7■■■■■ 41.4
SSR1-209ENST00000488834 CCDC171Q6TFL3 1326 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 PHLPP2Q6ZVD8 1323 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 RTEL1-TNFRSF6BF6WH68 1400 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 PPIP5K1Q6PFW1 1433 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 ARHGEF35A5YM69 484 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 PINLYPA6NC86 204 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 HELTA6NFD8 242 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 OR6C65A6NJZ3 312 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 GOLGA8SH3BPF8 625 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 WRBO00258 174 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 ABCD4O14678 606 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 ZNF208O43345 1280 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 DUX1O43812 170 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 SNNO75324 88 aaPredicted RBP2.69□□□□□ -1.98
SSR1-209ENST00000488834 GPX5O75715 221 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 HBQ1P09105 142 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 RALBP11234 206 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 NR2C1P13056 603 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 NUP62P37198 522 aaPredicted RBP2.69□□□□□ -1.98
SSR1-209ENST00000488834 EPS15P42566 896 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 UCNP55089 124 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 GNB2P62879 340 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 RPL8P62917 257 aaKnown RBP2.69□□□□□ -1.98
SSR1-209ENST00000488834 VLDLRP98155 873 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 OTUD4Q01804 1114 aaKnown RBP2.69□□□□□ -1.98
SSR1-209ENST00000488834 TGM3Q08188 693 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 MAPK6Q16659 721 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 EOGTQ5NDL2 527 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 RABGAP1LQ5R372 815 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 LCE3AQ5TA76 89 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 THOC7Q6I9Y2 204 aaKnown RBP2.69□□□□□ -1.98
SSR1-209ENST00000488834 CXCL17Q6UXB2 119 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 DNM1P46Q6ZS02 220 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 CYS1Q717R9 158 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 TMEM17Q86X19 198 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 MTURNQ8N3F0 131 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 OR5AU1Q8NGC0 362 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 OR9A1PQ8NGU1 263 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 OR8K3Q8NH51 312 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 CNIH3Q8TBE1 160 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 RAB3IL1Q8TBN0 382 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 SLC22A8Q8TCC7 542 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 ACMSDQ8TDX5 336 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 RNF138Q8WVD3 245 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 DNAJA4Q8WW22 397 aaPredicted RBP2.69□□□□□ -1.98
SSR1-209ENST00000488834 RLN3Q8WXF3 142 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.69□□□□□ -1.98
SSR1-209ENST00000488834 C8orf76Q96K31 380 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 ATP6V1G3Q96LB4 118 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 ZNF184Q99676 751 aaPredicted RBP2.69□□□□□ -1.98
SSR1-209ENST00000488834 SLC30A2Q9BRI3 323 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 TMEM121Q9BTD3 319 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 KRTAP4-3Q9BYR4 195 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 CAB39LQ9H9S4 337 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 MRPL39Q9NYK5 338 aaKnown RBP2.69□□□□□ -1.98
SSR1-209ENST00000488834 OR1A1Q9P1Q5 309 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 CYTH4Q9UIA0 394 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 ZNF221Q9UK13 617 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 PAIP2BQ9ULR5 123 aaKnown RBP2.69□□□□□ -1.98
SSR1-209ENST00000488834 TMCO1Q9UM00 188 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 SAMD4AQ9UPU9 718 aaKnown RBP2.69□□□□□ -1.98
SSR1-209ENST00000488834 TIMM22Q9Y584 194 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 INSRP06213 1382 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 PARD3Q8TEW0 1356 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 CCNB3Q8WWL7 1395 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 CCDC88BA6NC98 1476 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 ARHGAP23Q9P227 1491 aa2.69□□□□□ -1.98
SSR1-209ENST00000488834 SETD5Q9C0A6 1442 aa2.68□□□□□ -1.98
SSR1-209ENST00000488834 COL16A1Q07092 1604 aaPredicted RBP2.68□□□□□ -1.98
SSR1-209ENST00000488834 SHROOM2Q13796 1616 aa2.68□□□□□ -1.98
SSR1-209ENST00000488834 A0A0U1RQS6 177 aa2.68□□□□□ -1.98
SSR1-209ENST00000488834 OR52A4PA6NMU1 304 aa2.68□□□□□ -1.98
SSR1-209ENST00000488834 CLDN5O00501 218 aa2.68□□□□□ -1.98
SSR1-209ENST00000488834 CETN3O15182 167 aa2.68□□□□□ -1.98
SSR1-209ENST00000488834 RTL8CO15255 209 aa2.68□□□□□ -1.98
SSR1-209ENST00000488834 NVLO15381 856 aaKnown RBP2.68□□□□□ -1.98
SSR1-209ENST00000488834 MGRN1O60291 552 aa2.68□□□□□ -1.98
SSR1-209ENST00000488834 WBP4O75554 376 aaKnown RBP2.68□□□□□ -1.98
SSR1-209ENST00000488834 MBD3O95983 291 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms