RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 CLIC1O00299 241 aa20.38■□□□□ 0.85
CUL4A-209ENST00000488558 CLOCKO15516 846 aa20.38■□□□□ 0.85
CUL4A-209ENST00000488558 RAMP1O60894 148 aa20.38■□□□□ 0.85
CUL4A-209ENST00000488558 CXCR1P25024 350 aa20.38■□□□□ 0.85
CUL4A-209ENST00000488558 IDUAP35475 653 aa20.38■□□□□ 0.85
CUL4A-209ENST00000488558 IDH3AP50213 366 aa20.38■□□□□ 0.85
CUL4A-209ENST00000488558 RPS26P11Q5JNZ5 115 aaPredicted RBP20.38■□□□□ 0.85
CUL4A-209ENST00000488558 BLOC1S3Q6QNY0 202 aa20.38■□□□□ 0.85
CUL4A-209ENST00000488558 UBE2J2Q8N2K1 259 aa20.38■□□□□ 0.85
CUL4A-209ENST00000488558 BBS10Q8TAM1 723 aa20.38■□□□□ 0.85
CUL4A-209ENST00000488558 DNAJA3Q96EY1 480 aa20.38■□□□□ 0.85
CUL4A-209ENST00000488558 PARPBPQ9NWS1 579 aa20.38■□□□□ 0.85
CUL4A-209ENST00000488558 TAS2R16Q9NYV7 291 aa20.38■□□□□ 0.85
CUL4A-209ENST00000488558 FLVCR1Q9Y5Y0 555 aa20.38■□□□□ 0.85
CUL4A-209ENST00000488558 GMEB1Q9Y692 573 aa20.38■□□□□ 0.85
CUL4A-209ENST00000488558 NSD1Q96L73 2696 aaPredicted RBP20.37■□□□□ 0.85
CUL4A-209ENST00000488558 DPRXA6NFQ7 191 aa20.37■□□□□ 0.85
CUL4A-209ENST00000488558 GPIP06744 558 aa20.37■□□□□ 0.85
CUL4A-209ENST00000488558 GKN3PP0CG01 181 aa20.37■□□□□ 0.85
CUL4A-209ENST00000488558 NTF4P34130 210 aa20.37■□□□□ 0.85
CUL4A-209ENST00000488558 RPS4XP62701 263 aaKnown RBP20.37■□□□□ 0.85
CUL4A-209ENST00000488558 SLC17A1Q14916 467 aa20.37■□□□□ 0.85
CUL4A-209ENST00000488558 ZNF672Q499Z4 452 aaPredicted RBP20.37■□□□□ 0.85
CUL4A-209ENST00000488558 TTMPQ5BVD1 217 aa20.37■□□□□ 0.85
CUL4A-209ENST00000488558 FUNDC1Q8IVP5 155 aa20.37■□□□□ 0.85
CUL4A-209ENST00000488558 STON2Q8WXE9 905 aa20.37■□□□□ 0.85
CUL4A-209ENST00000488558 EBF4Q9BQW3 602 aa20.37■□□□□ 0.85
CUL4A-209ENST00000488558 SF3B5Q9BWJ5 86 aaKnown RBP20.37■□□□□ 0.85
CUL4A-209ENST00000488558 PIF1Q9H611 641 aa20.37■□□□□ 0.85
CUL4A-209ENST00000488558 CHST2Q9Y4C5 530 aa20.37■□□□□ 0.85
CUL4A-209ENST00000488558 LIPT2A6NK58 231 aa20.36■□□□□ 0.85
CUL4A-209ENST00000488558 IGHV3-9P01782 118 aa20.36■□□□□ 0.85
CUL4A-209ENST00000488558 DANCRP0C864 163 aa20.36■□□□□ 0.85
CUL4A-209ENST00000488558 HOXB4P17483 251 aaPredicted RBP20.36■□□□□ 0.85
CUL4A-209ENST00000488558 PPIBP23284 216 aaKnown RBP20.36■□□□□ 0.85
CUL4A-209ENST00000488558 ATP4BP51164 291 aa20.36■□□□□ 0.85
CUL4A-209ENST00000488558 C1QTNF12Q5T7M4 302 aa20.36■□□□□ 0.85
CUL4A-209ENST00000488558 OR7E24Q6IFN5 339 aa20.36■□□□□ 0.85
CUL4A-209ENST00000488558 CASP12Q6UXS9 341 aa20.36■□□□□ 0.85
CUL4A-209ENST00000488558 ATG4DQ86TL0 474 aaPredicted RBP20.36■□□□□ 0.85
CUL4A-209ENST00000488558 CLIP4Q8N3C7 705 aa20.36■□□□□ 0.85
CUL4A-209ENST00000488558 CADM2Q8N3J6 435 aa20.36■□□□□ 0.85
CUL4A-209ENST00000488558 KBTBD8Q8NFY9 601 aa20.36■□□□□ 0.85
CUL4A-209ENST00000488558 DYDC1Q8WWB3 177 aa20.36■□□□□ 0.85
CUL4A-209ENST00000488558 TMEM45BQ96B21 275 aa20.36■□□□□ 0.85
CUL4A-209ENST00000488558 SPDL1Q96EA4 605 aa20.36■□□□□ 0.85
CUL4A-209ENST00000488558 TRIM2Q9C040 744 aa20.36■□□□□ 0.85
CUL4A-209ENST00000488558 SLC25A37Q9NYZ2 338 aa20.36■□□□□ 0.85
CUL4A-209ENST00000488558 AQP7P3A6NL99 342 aa20.35■□□□□ 0.85
CUL4A-209ENST00000488558 A8MVM7 634 aa20.35■□□□□ 0.85
CUL4A-209ENST00000488558 H7C1Q1 480 aa20.35■□□□□ 0.85
CUL4A-209ENST00000488558 OVOL3O00110 214 aa20.35■□□□□ 0.85
CUL4A-209ENST00000488558 PDLIM1O00151 329 aa20.35■□□□□ 0.85
CUL4A-209ENST00000488558 RAD51DO75771 328 aa20.35■□□□□ 0.85
CUL4A-209ENST00000488558 HEXAP06865 529 aa20.35■□□□□ 0.85
CUL4A-209ENST00000488558 NUDT7P0C024 238 aa20.35■□□□□ 0.85
CUL4A-209ENST00000488558 AQP5P55064 265 aa20.35■□□□□ 0.85
CUL4A-209ENST00000488558 ZNF311Q5JNZ3 666 aa20.35■□□□□ 0.85
CUL4A-209ENST00000488558 OTUD3Q5T2D3 398 aaPredicted RBP20.35■□□□□ 0.85
CUL4A-209ENST00000488558 RADILQ96JH8 1075 aa20.35■□□□□ 0.85
CUL4A-209ENST00000488558 AMBRA1Q9C0C7 1298 aa20.35■□□□□ 0.85
CUL4A-209ENST00000488558 SLC52A3Q9NQ40 469 aa20.35■□□□□ 0.85
CUL4A-209ENST00000488558 NPAP1Q9NZP6 1156 aa20.35■□□□□ 0.85
CUL4A-209ENST00000488558 CCDC167Q9P0B6 97 aa20.35■□□□□ 0.85
CUL4A-209ENST00000488558 DCTN4Q9UJW0 460 aa20.35■□□□□ 0.85
CUL4A-209ENST00000488558 LAMP3Q9UQV4 416 aa20.35■□□□□ 0.85
CUL4A-209ENST00000488558 CIB4A0PJX0 185 aa20.34■□□□□ 0.85
CUL4A-209ENST00000488558 HMGB1P1B2RPK0 211 aaPredicted RBP20.34■□□□□ 0.85
CUL4A-209ENST00000488558 TMEM229AB2RXF0 380 aa20.34■□□□□ 0.85
CUL4A-209ENST00000488558 C5orf58C9J3I9 102 aa20.34■□□□□ 0.85
CUL4A-209ENST00000488558 NPIPB7O75200 414 aa20.34■□□□□ 0.85
CUL4A-209ENST00000488558 PRG2P13727 222 aa20.34■□□□□ 0.85
CUL4A-209ENST00000488558 ETS2P15036 469 aa20.34■□□□□ 0.85
CUL4A-209ENST00000488558 NCF2P19878 526 aaPredicted RBP20.34■□□□□ 0.85
CUL4A-209ENST00000488558 FAPQ12884 760 aa20.34■□□□□ 0.85
CUL4A-209ENST00000488558 CEACAM7Q14002 265 aa20.34■□□□□ 0.85
CUL4A-209ENST00000488558 OR7A5Q15622 319 aa20.34■□□□□ 0.85
CUL4A-209ENST00000488558 CLEC9AQ6UXN8 241 aa20.34■□□□□ 0.85
CUL4A-209ENST00000488558 SERPINA11Q86U17 422 aa20.34■□□□□ 0.85
CUL4A-209ENST00000488558 MSRB3Q8IXL7 192 aa20.34■□□□□ 0.85
CUL4A-209ENST00000488558 C17orf78Q8N4C9 275 aa20.34■□□□□ 0.85
CUL4A-209ENST00000488558 C1orf162Q8NEQ5 155 aaPredicted RBP20.34■□□□□ 0.85
CUL4A-209ENST00000488558 SMAP2Q8WU79 429 aaPredicted RBP20.34■□□□□ 0.85
CUL4A-209ENST00000488558 MAL2Q969L2 176 aa20.34■□□□□ 0.85
CUL4A-209ENST00000488558 C3orf49Q96BT1 292 aa20.34■□□□□ 0.85
CUL4A-209ENST00000488558 MUS81Q96NY9 551 aa20.34■□□□□ 0.85
CUL4A-209ENST00000488558 SMR3AQ99954 134 aa20.34■□□□□ 0.85
CUL4A-209ENST00000488558 TAPBPLQ9BX59 468 aa20.34■□□□□ 0.85
CUL4A-209ENST00000488558 SLC25A15Q9Y619 301 aa20.34■□□□□ 0.85
CUL4A-209ENST00000488558 TRBV5-3A0A0A0MS03 114 aa20.33■□□□□ 0.85
CUL4A-209ENST00000488558 CCT8L1PA6NM43 557 aa20.33■□□□□ 0.85
CUL4A-209ENST00000488558 NR5A2O00482 541 aa20.33■□□□□ 0.85
CUL4A-209ENST00000488558 FRS3O43559 492 aa20.33■□□□□ 0.85
CUL4A-209ENST00000488558 ITGA5P08648 1049 aa20.33■□□□□ 0.85
CUL4A-209ENST00000488558 ARAFP10398 606 aa20.33■□□□□ 0.85
CUL4A-209ENST00000488558 PRKAR1BP31321 381 aa20.33■□□□□ 0.85
CUL4A-209ENST00000488558 ATP5J2P56134 94 aa20.33■□□□□ 0.85
CUL4A-209ENST00000488558 ETFDHQ16134 617 aa20.33■□□□□ 0.85
CUL4A-209ENST00000488558 GABRA6Q16445 453 aa20.33■□□□□ 0.85
CUL4A-209ENST00000488558 TMEM108Q6UXF1 575 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms