RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 OR7A5Q15622 319 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 SWT1Q5T5J6 900 aaKnown RBP9.88□□□□□ -0.83
UBE4B-210ENST00000488228 LCN8Q6JVE9 175 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 TMPPEQ6ZT21 453 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 CCDC121Q6ZUS5 278 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 FCRLAQ7L513 359 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 TSEN54Q7Z6J9 526 aaKnown RBP9.88□□□□□ -0.83
UBE4B-210ENST00000488228 MRGPRGQ86SM5 289 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 DHFR2Q86XF0 187 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 RNF128Q8TEB7 428 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 SLC38A4Q969I6 547 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 MCUR1Q96AQ8 359 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 ASB9Q96DX5 294 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 KTI12Q96EK9 354 aaPredicted RBP9.88□□□□□ -0.83
UBE4B-210ENST00000488228 SLC47A1Q96FL8 570 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 SLC41A3Q96GZ6 507 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 TM9SF2Q99805 663 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 PTDSS2Q9BVG9 487 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 PRRG4Q9BZD6 226 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 MUC13Q9H3R2 512 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 RNF122Q9H9V4 155 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 C12orf10Q9HB07 376 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 PAQR5Q9NXK6 330 aaPredicted RBP9.88□□□□□ -0.83
UBE4B-210ENST00000488228 ACTR3BQ9P1U1 418 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 RHCGQ9UBD6 479 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 A4GNTQ9UNA3 340 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 HDGFL3Q9Y3E1 203 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 ANKHD1Q8IWZ3 2542 aaKnown RBP9.87□□□□□ -0.83
UBE4B-210ENST00000488228 A0A087WUJ7 227 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 A0A1W2PNV4 684 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 TCRBV5S2A0A599 114 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 WIPF3A6NGB9 483 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 LIPT2A6NK58 231 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 LRRN3E7EW58 273 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 EBAG9O00559 213 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 FFAR1O14842 300 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 GSC2O15499 205 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 PIP5K1CO60331 668 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 RAMP1O60894 148 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 NPIPB7O75200 414 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 DIRAS1O95057 198 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 OR5F1O95221 314 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 IL2RAP01589 272 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 MT-ND1P03886 318 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 BMP5P22003 454 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 CHRNB4P30926 498 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 CLK1P49759 484 aaKnown RBP9.87□□□□□ -0.83
UBE4B-210ENST00000488228 ERFP50548 548 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 UGT2B15P54855 530 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 RAC3P60763 192 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 CSNK2A1P68400 391 aaPredicted RBP9.87□□□□□ -0.83
UBE4B-210ENST00000488228 ABLIM2Q6H8Q1 611 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 VWA1Q6PCB0 445 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 PGM2L1Q6PCE3 622 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 LIX1LQ8IVB5 337 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 NKAIN4Q8IVV8 208 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 OFCC1Q8IZS5 231 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 ZNF808Q8N4W9 903 aaPredicted RBP9.87□□□□□ -0.83
UBE4B-210ENST00000488228 CNEP1R1Q8N9A8 125 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 RELL2Q8NC24 303 aaPredicted RBP9.87□□□□□ -0.83
UBE4B-210ENST00000488228 STK35Q8TDR2 534 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 PRSS27Q9BQR3 290 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 TIGARQ9NQ88 270 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 MAN2C1Q9NTJ4 1040 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 COQ3Q9NZJ6 369 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 KLHL13Q9P2N7 655 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 SEC14L4Q9UDX3 406 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 RIMS3Q9UJD0 308 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 ENPP4Q9Y6X5 453 aa9.87□□□□□ -0.83
UBE4B-210ENST00000488228 TRAV36DV7A0A075B6V5 113 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 NKX2-6A6NCS4 301 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 HSPB2A8KAH6 182 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 FTCDNL1E5RQL4 147 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 ACOT8O14734 319 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 TNFSF13O75888 250 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 ATP5HO75947 161 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 PRSS23O95084 383 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 AKR7A3O95154 331 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 RCBTB2O95199 551 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 PLGP00747 810 aaPredicted RBP9.86□□□□□ -0.83
UBE4B-210ENST00000488228 FPR1P21462 350 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 CBLP22681 906 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 RASSF2P50749 326 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 MAP2K6P52564 334 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 SLC35A1P78382 337 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 FLOT2Q14254 428 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 HSPB2Q16082 182 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 MTX3Q5HYI7 312 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 OR2A2Q6IF42 318 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 PFN4Q8NHR9 129 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 TMEM255BQ8WV15 326 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 TAAR8Q969N4 342 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 SLC25A36Q96CQ1 311 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 ZHX1-C8orf76Q96EF9 292 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 PYURFQ96I23 114 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 C7orf34Q96L11 122 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 MOGAT1Q96PD6 335 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 SEPHS2Q99611 448 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 TMEM43Q9BTV4 400 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 ZNF426Q9BUY5 554 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms