RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 SAP130Q9H0E3 1048 aa16.95■□□□□ 0.3
SMPDL3A-202ENST00000487215 MKS1Q9NXB0 559 aa16.95■□□□□ 0.3
SMPDL3A-202ENST00000487215 TMED7Q9Y3B3 224 aa16.95■□□□□ 0.3
SMPDL3A-202ENST00000487215 ARFGEF3Q5TH69 2177 aa16.95■□□□□ 0.3
SMPDL3A-202ENST00000487215 NUP214P35658 2090 aaPredicted RBP16.95■□□□□ 0.3
SMPDL3A-202ENST00000487215 TMEM72A0PK05 275 aa16.94■□□□□ 0.3
SMPDL3A-202ENST00000487215 RNASET2O00584 256 aaKnown RBP16.94■□□□□ 0.3
SMPDL3A-202ENST00000487215 AP3D1O14617 1153 aa16.94■□□□□ 0.3
SMPDL3A-202ENST00000487215 ZNF208O43345 1280 aa16.94■□□□□ 0.3
SMPDL3A-202ENST00000487215 AGR2O95994 175 aa16.94■□□□□ 0.3
SMPDL3A-202ENST00000487215 CDH2P19022 906 aaPredicted RBP16.94■□□□□ 0.3
SMPDL3A-202ENST00000487215 SERPINF1P36955 418 aa16.94■□□□□ 0.3
SMPDL3A-202ENST00000487215 HTR3AP46098 478 aa16.94■□□□□ 0.3
SMPDL3A-202ENST00000487215 CLDN8P56748 225 aa16.94■□□□□ 0.3
SMPDL3A-202ENST00000487215 KCNJ10P78508 379 aa16.94■□□□□ 0.3
SMPDL3A-202ENST00000487215 SPATA19Q7Z5L4 167 aa16.94■□□□□ 0.3
SMPDL3A-202ENST00000487215 OR4A15Q8NGL6 344 aa16.94■□□□□ 0.3
SMPDL3A-202ENST00000487215 TUBGCP3Q96CW5 907 aa16.94■□□□□ 0.3
SMPDL3A-202ENST00000487215 DDIT4LQ96D03 193 aa16.94■□□□□ 0.3
SMPDL3A-202ENST00000487215 C1orf159Q96HA4 380 aa16.94■□□□□ 0.3
SMPDL3A-202ENST00000487215 APOPT1Q96IL0 206 aa16.94■□□□□ 0.3
SMPDL3A-202ENST00000487215 CA10Q9NS85 328 aa16.94■□□□□ 0.3
SMPDL3A-202ENST00000487215 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.94■□□□□ 0.3
SMPDL3A-202ENST00000487215 ZDHHC2Q9UIJ5 367 aa16.94■□□□□ 0.3
SMPDL3A-202ENST00000487215 OSGIN1Q9UJX0 560 aa16.94■□□□□ 0.3
SMPDL3A-202ENST00000487215 TLDC2A0PJX2 215 aa16.93■□□□□ 0.3
SMPDL3A-202ENST00000487215 ZC3H12DA2A288 527 aaKnown RBP16.93■□□□□ 0.3
SMPDL3A-202ENST00000487215 LRP5LA4QPB2 252 aa16.93■□□□□ 0.3
SMPDL3A-202ENST00000487215 POLR2HP52434 150 aaKnown RBP16.93■□□□□ 0.3
SMPDL3A-202ENST00000487215 PAQR6Q6TCH4 344 aa16.93■□□□□ 0.3
SMPDL3A-202ENST00000487215 RFLNBQ8N5W9 214 aa16.93■□□□□ 0.3
SMPDL3A-202ENST00000487215 ZIC4Q8N9L1 334 aa16.93■□□□□ 0.3
SMPDL3A-202ENST00000487215 ZNF540Q8NDQ6 660 aa16.93■□□□□ 0.3
SMPDL3A-202ENST00000487215 CNOT9Q92600 299 aaKnown RBP16.93■□□□□ 0.3
SMPDL3A-202ENST00000487215 PMM1Q92871 262 aa16.93■□□□□ 0.3
SMPDL3A-202ENST00000487215 BOD1Q96IK1 185 aa16.93■□□□□ 0.3
SMPDL3A-202ENST00000487215 ZNF385AQ96PM9 386 aaKnown RBP16.93■□□□□ 0.3
SMPDL3A-202ENST00000487215 SLC38A2Q96QD8 506 aa16.93■□□□□ 0.3
SMPDL3A-202ENST00000487215 OBP2BQ9NPH6 170 aa16.93■□□□□ 0.3
SMPDL3A-202ENST00000487215 PRAMEF27A3QJZ7 478 aa16.92■□□□□ 0.3
SMPDL3A-202ENST00000487215 B9A039 149 aa16.92■□□□□ 0.3
SMPDL3A-202ENST00000487215 TCF21O43680 179 aa16.92■□□□□ 0.3
SMPDL3A-202ENST00000487215 TACR3P29371 465 aa16.92■□□□□ 0.3
SMPDL3A-202ENST00000487215 SERPINB5P36952 375 aa16.92■□□□□ 0.3
SMPDL3A-202ENST00000487215 ADIPOQQ15848 244 aa16.92■□□□□ 0.3
SMPDL3A-202ENST00000487215 OTUD3Q5T2D3 398 aaPredicted RBP16.92■□□□□ 0.3
SMPDL3A-202ENST00000487215 AAED1Q7RTV5 226 aa16.92■□□□□ 0.3
SMPDL3A-202ENST00000487215 POMGNT2Q8NAT1 580 aa16.92■□□□□ 0.3
SMPDL3A-202ENST00000487215 OR9K2Q8NGE7 335 aa16.92■□□□□ 0.3
SMPDL3A-202ENST00000487215 KCNS3Q9BQ31 491 aa16.92■□□□□ 0.3
SMPDL3A-202ENST00000487215 KATNB1Q9BVA0 655 aa16.92■□□□□ 0.3
SMPDL3A-202ENST00000487215 HEATR1Q9H583 2144 aaKnown RBP16.92■□□□□ 0.3
SMPDL3A-202ENST00000487215 ASIC5Q9NY37 505 aa16.92■□□□□ 0.3
SMPDL3A-202ENST00000487215 SLC17A7Q9P2U7 560 aa16.92■□□□□ 0.3
SMPDL3A-202ENST00000487215 SCN2BO60939 215 aa16.91■□□□□ 0.3
SMPDL3A-202ENST00000487215 PDE5AO76074 875 aa16.91■□□□□ 0.3
SMPDL3A-202ENST00000487215 OR4A8P0C604 315 aa16.91■□□□□ 0.3
SMPDL3A-202ENST00000487215 UQCRC2P22695 453 aa16.91■□□□□ 0.3
SMPDL3A-202ENST00000487215 KHKP50053 298 aa16.91■□□□□ 0.3
SMPDL3A-202ENST00000487215 PPOXP50336 477 aa16.91■□□□□ 0.3
SMPDL3A-202ENST00000487215 EMX2Q04743 252 aa16.91■□□□□ 0.3
SMPDL3A-202ENST00000487215 MAD2L1Q13257 205 aaPredicted RBP16.91■□□□□ 0.3
SMPDL3A-202ENST00000487215 EFNB3Q15768 340 aa16.91■□□□□ 0.3
SMPDL3A-202ENST00000487215 ZSWIM7Q19AV6 140 aa16.91■□□□□ 0.3
SMPDL3A-202ENST00000487215 TBRG1Q3YBR2 411 aa16.91■□□□□ 0.3
SMPDL3A-202ENST00000487215 GPAT3Q53EU6 434 aa16.91■□□□□ 0.3
SMPDL3A-202ENST00000487215 SAXO2Q658L1 398 aa16.91■□□□□ 0.3
SMPDL3A-202ENST00000487215 VHLLQ6RSH7 139 aa16.91■□□□□ 0.3
SMPDL3A-202ENST00000487215 ANKRD46Q86W74 232 aa16.91■□□□□ 0.3
SMPDL3A-202ENST00000487215 MEX3DQ86XN8 651 aaKnown RBP16.91■□□□□ 0.3
SMPDL3A-202ENST00000487215 TMEM99Q8N816 258 aa16.91■□□□□ 0.3
SMPDL3A-202ENST00000487215 OR8J2Q8NGG1 315 aa16.91■□□□□ 0.3
SMPDL3A-202ENST00000487215 AURKBQ96GD4 344 aaPredicted RBP16.91■□□□□ 0.3
SMPDL3A-202ENST00000487215 PLK3Q9H4B4 646 aa16.91■□□□□ 0.3
SMPDL3A-202ENST00000487215 NOP53Q9NZM5 478 aaKnown RBP16.91■□□□□ 0.3
SMPDL3A-202ENST00000487215 AKR7A3O95154 331 aa16.9■□□□□ 0.3
SMPDL3A-202ENST00000487215 STAMBPO95630 424 aa16.9■□□□□ 0.3
SMPDL3A-202ENST00000487215 CPSF4O95639 269 aaKnown RBP16.9■□□□□ 0.3
SMPDL3A-202ENST00000487215 LGI1O95970 557 aa16.9■□□□□ 0.3
SMPDL3A-202ENST00000487215 CRYAAP02489 173 aa16.9■□□□□ 0.3
SMPDL3A-202ENST00000487215 ITGA2P17301 1181 aa16.9■□□□□ 0.3
SMPDL3A-202ENST00000487215 IL2RGP31785 369 aa16.9■□□□□ 0.3
SMPDL3A-202ENST00000487215 IDH3GP51553 393 aaPredicted RBP16.9■□□□□ 0.3
SMPDL3A-202ENST00000487215 HPCAP84074 193 aa16.9■□□□□ 0.3
SMPDL3A-202ENST00000487215 NAAAQ02083 359 aa16.9■□□□□ 0.3
SMPDL3A-202ENST00000487215 IFFO1Q0D2I5 559 aa16.9■□□□□ 0.3
SMPDL3A-202ENST00000487215 ABHD12BQ7Z5M8 362 aaPredicted RBP16.9■□□□□ 0.3
SMPDL3A-202ENST00000487215 OR1K1Q8NGR3 316 aa16.9■□□□□ 0.3
SMPDL3A-202ENST00000487215 NEURL3Q96EH8 262 aa16.9■□□□□ 0.3
SMPDL3A-202ENST00000487215 SF3B5Q9BWJ5 86 aaKnown RBP16.9■□□□□ 0.3
SMPDL3A-202ENST00000487215 ROPN1BQ9BZX4 212 aaPredicted RBP16.9■□□□□ 0.3
SMPDL3A-202ENST00000487215 ROPN1Q9HAT0 212 aaPredicted RBP16.9■□□□□ 0.3
SMPDL3A-202ENST00000487215 TMEM45AQ9NWC5 275 aa16.9■□□□□ 0.3
SMPDL3A-202ENST00000487215 LIPT2A6NK58 231 aa16.89■□□□□ 0.29
SMPDL3A-202ENST00000487215 C1QCP02747 245 aa16.89■□□□□ 0.29
SMPDL3A-202ENST00000487215 NUDT17P0C025 328 aa16.89■□□□□ 0.29
SMPDL3A-202ENST00000487215 GIFP27352 417 aa16.89■□□□□ 0.29
SMPDL3A-202ENST00000487215 SLC1A3P43003 542 aa16.89■□□□□ 0.29
SMPDL3A-202ENST00000487215 MAP2K6P52564 334 aa16.89■□□□□ 0.29
SMPDL3A-202ENST00000487215 CHN2P52757 468 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms