RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 IFT52Q9Y366 437 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 RNF115Q9Y4L5 304 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 PCDHB14Q9Y5E9 798 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 ARID1AO14497 2285 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 ZNF469Q96JG9 3925 aaPredicted RBP12.74□□□□□ -0.37
CLDN11-207ENST00000486975 TMEM72A0PK05 275 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 CLIC1O00299 241 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 LYZL6O75951 148 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 PGM3O95394 542 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 PLAUP00749 431 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 IMPDH2P12268 514 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 IGHV1-2P23083 117 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 ATP4BP51164 291 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 OR2B6P58173 313 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 TIMM23BQ5SRD1 257 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 WBP2NLQ6ICG8 309 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 SLC2A7Q6PXP3 512 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 PAQR6Q6TCH4 344 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 BIVMQ86UB2 503 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 GOLGA6L1Q8N7Z2 621 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 APH1AQ96BI3 265 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 EBF4Q9BQW3 602 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 NAA11Q9BSU3 229 aaPredicted RBP12.73□□□□□ -0.37
CLDN11-207ENST00000486975 ARMC7Q9H6L4 198 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 VIPAS39Q9H9C1 493 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 SLC52A3Q9NQ40 469 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 ZNF701Q9NV72 531 aaPredicted RBP12.73□□□□□ -0.37
CLDN11-207ENST00000486975 ZNF232Q9UNY5 417 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 NOSIPQ9Y314 301 aaKnown RBP12.73□□□□□ -0.37
CLDN11-207ENST00000486975 CHST2Q9Y4C5 530 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 PRR14LQ5THK1 2151 aa12.73□□□□□ -0.37
CLDN11-207ENST00000486975 ZC3H12DA2A288 527 aaKnown RBP12.72□□□□□ -0.37
CLDN11-207ENST00000486975 OR5H1A6NKK0 313 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 HMGB1P1B2RPK0 211 aaPredicted RBP12.72□□□□□ -0.37
CLDN11-207ENST00000486975 RAMP1O60894 148 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 CD3EP07766 207 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 ETS2P15036 469 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 GGT1P19440 569 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 CCNA2P20248 432 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 PPIBP23284 216 aaKnown RBP12.72□□□□□ -0.37
CLDN11-207ENST00000486975 NTF4P34130 210 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 IDUAP35475 653 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 AQP5P55064 265 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 COPZ1P61923 177 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 SLC17A1Q14916 467 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 KRTAP21-3Q3LHN1 58 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 CCDC103Q8IW40 242 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 MSRB3Q8IXL7 192 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 ZNF433Q8N7K0 673 aaPredicted RBP12.72□□□□□ -0.37
CLDN11-207ENST00000486975 BBS10Q8TAM1 723 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 TMEM171Q8WVE6 324 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 SPDL1Q96EA4 605 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 CXorf56Q9H5V9 222 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 PIF1Q9H611 641 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 CACYBPQ9HB71 228 aaKnown RBP12.72□□□□□ -0.37
CLDN11-207ENST00000486975 PARPBPQ9NWS1 579 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 SLC25A37Q9NYZ2 338 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 SLC9A8Q9Y2E8 581 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 DSCAMO60469 2012 aa12.72□□□□□ -0.37
CLDN11-207ENST00000486975 TRBV5-3A0A0A0MS03 114 aa12.71□□□□□ -0.37
CLDN11-207ENST00000486975 LIPT2A6NK58 231 aa12.71□□□□□ -0.37
CLDN11-207ENST00000486975 NPIPB7O75200 414 aa12.71□□□□□ -0.37
CLDN11-207ENST00000486975 MRPL33O75394 65 aaKnown RBP12.71□□□□□ -0.37
CLDN11-207ENST00000486975 GPIP06744 558 aa12.71□□□□□ -0.37
CLDN11-207ENST00000486975 GKN3PP0CG01 181 aa12.71□□□□□ -0.37
CLDN11-207ENST00000486975 CXCR1P25024 350 aa12.71□□□□□ -0.37
CLDN11-207ENST00000486975 PTH2RP49190 550 aa12.71□□□□□ -0.37
CLDN11-207ENST00000486975 PPA1Q15181 289 aa12.71□□□□□ -0.37
CLDN11-207ENST00000486975 RPS26P11Q5JNZ5 115 aaPredicted RBP12.71□□□□□ -0.37
CLDN11-207ENST00000486975 C1QTNF12Q5T7M4 302 aa12.71□□□□□ -0.37
CLDN11-207ENST00000486975 VASH1Q7L8A9 365 aaPredicted RBP12.71□□□□□ -0.37
CLDN11-207ENST00000486975 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.71□□□□□ -0.37
CLDN11-207ENST00000486975 HDXQ7Z353 690 aa12.71□□□□□ -0.37
CLDN11-207ENST00000486975 CLIP4Q8N3C7 705 aa12.71□□□□□ -0.37
CLDN11-207ENST00000486975 LILRB1Q8NHL6 650 aaPredicted RBP12.71□□□□□ -0.37
CLDN11-207ENST00000486975 DYDC1Q8WWB3 177 aa12.71□□□□□ -0.37
CLDN11-207ENST00000486975 AKAP1Q92667 903 aaKnown RBP eCLIP12.71□□□□□ -0.37
CLDN11-207ENST00000486975 TMEM45BQ96B21 275 aa12.71□□□□□ -0.37
CLDN11-207ENST00000486975 MUCL1Q96DR8 90 aa12.71□□□□□ -0.37
CLDN11-207ENST00000486975 COX4I2Q96KJ9 171 aa12.71□□□□□ -0.37
CLDN11-207ENST00000486975 SF3B5Q9BWJ5 86 aaKnown RBP12.71□□□□□ -0.37
CLDN11-207ENST00000486975 INTS9Q9NV88 658 aaKnown RBP12.71□□□□□ -0.37
CLDN11-207ENST00000486975 ASB6Q9NWX5 421 aa12.71□□□□□ -0.37
CLDN11-207ENST00000486975 TAS2R16Q9NYV7 291 aa12.71□□□□□ -0.37
CLDN11-207ENST00000486975 CCDC167Q9P0B6 97 aa12.71□□□□□ -0.37
CLDN11-207ENST00000486975 FLVCR1Q9Y5Y0 555 aa12.71□□□□□ -0.37
CLDN11-207ENST00000486975 ZFHX3Q15911 3703 aa12.71□□□□□ -0.38
CLDN11-207ENST00000486975 DPRXA6NFQ7 191 aa12.7□□□□□ -0.38
CLDN11-207ENST00000486975 AQP7P3A6NL99 342 aa12.7□□□□□ -0.38
CLDN11-207ENST00000486975 A8MVM7 634 aa12.7□□□□□ -0.38
CLDN11-207ENST00000486975 TMEM229AB2RXF0 380 aa12.7□□□□□ -0.38
CLDN11-207ENST00000486975 PDLIM1O00151 329 aa12.7□□□□□ -0.38
CLDN11-207ENST00000486975 INHBBP09529 407 aa12.7□□□□□ -0.38
CLDN11-207ENST00000486975 ARAFP10398 606 aa12.7□□□□□ -0.38
CLDN11-207ENST00000486975 PRG2P13727 222 aa12.7□□□□□ -0.38
CLDN11-207ENST00000486975 BSPH1Q075Z2 132 aa12.7□□□□□ -0.38
CLDN11-207ENST00000486975 CAPRIN1Q14444 709 aaKnown RBP12.7□□□□□ -0.38
CLDN11-207ENST00000486975 SQLEQ14534 574 aa12.7□□□□□ -0.38
CLDN11-207ENST00000486975 STK11Q15831 433 aa12.7□□□□□ -0.38
CLDN11-207ENST00000486975 ZNF311Q5JNZ3 666 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms