RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 AP2S1P53680 142 aaPredicted RBP12.2□□□□□ -0.46
HMGN1-216ENST00000486741 AP3S2P59780 193 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 EEF1A2Q05639 463 aaKnown RBP12.2□□□□□ -0.46
HMGN1-216ENST00000486741 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.2□□□□□ -0.46
HMGN1-216ENST00000486741 FAM27D1Q5T7N8 215 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 SLC25A25Q6KCM7 469 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 KCTD18Q6PI47 426 aaPredicted RBP12.2□□□□□ -0.46
HMGN1-216ENST00000486741 LYSMD2Q8IV50 215 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 GALNT6Q8NCL4 622 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 WDR77Q9BQA1 342 aaPredicted RBP12.2□□□□□ -0.46
HMGN1-216ENST00000486741 NXF5Q9H1B4 397 aaKnown RBP12.2□□□□□ -0.46
HMGN1-216ENST00000486741 CPNE5Q9HCH3 593 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 SDK2Q58EX2 2172 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 DCDC2BA2VCK2 349 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 CHP2O43745 196 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 SELENOFO60613 162 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 SLC19A2O60779 497 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 SCRG1O75711 98 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 H2BFMP0C1H6 154 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 CHRNB1P11230 501 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 ZNF20P17024 532 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 CAPZBP47756 277 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 C21orf58P58505 322 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 SNRPD2P62316 118 aaKnown RBP12.19□□□□□ -0.46
HMGN1-216ENST00000486741 ACY1Q03154 408 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 ZIC1Q15915 447 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 LIN54Q6MZP7 749 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 DHRS4L2Q6PKH6 230 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 ZNF782Q6ZMW2 699 aaPredicted RBP12.19□□□□□ -0.46
HMGN1-216ENST00000486741 OR5AK2Q8NH90 309 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 FKBP10Q96AY3 582 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 LCORQ96JN0 433 aaPredicted RBP12.19□□□□□ -0.46
HMGN1-216ENST00000486741 CACNG6Q9BXT2 260 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 LHX9Q9NQ69 397 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 KLHL21Q9UJP4 597 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 POMT2Q9UKY4 750 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 IGHV5-51A0A0C4DH38 117 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 LYRM1O43325 122 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 PRAMEF8Q5VWM4 474 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 PRAMEF7Q5VXH5 474 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 LAIR1Q6GTX8 287 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 OR7E24Q6IFN5 339 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 XKRXQ6PP77 449 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 OR13C5Q8NGS8 318 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 OR4Q3Q8NH05 313 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 ASB15Q8WXK1 588 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 ORAI1Q96D31 301 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 ALG12Q9BV10 488 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 ISG20L2Q9H9L3 353 aaKnown RBP12.19□□□□□ -0.46
HMGN1-216ENST00000486741 SVILO95425 2214 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 MEIS3P1A6NDR6 274 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 HIST1H1CP16403 213 aaKnown RBP12.19□□□□□ -0.46
HMGN1-216ENST00000486741 CLRN1P58418 232 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 TSPAN5P62079 268 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 GAB4Q2WGN9 574 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 C4orf46Q504U0 113 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 BCL2L15Q5TBC7 163 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 SLC6A19Q695T7 634 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 BCORP1Q8N888 145 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 PPP1R14AQ96A00 147 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 SUSD2Q9UGT4 822 aa12.19□□□□□ -0.46
HMGN1-216ENST00000486741 C4orf51C9J302 202 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 HRKO00198 91 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 NUDT1P36639 197 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 ZMAT1Q5H9K5 638 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 KIRREL2Q6UWL6 708 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 ZNF227Q86WZ6 799 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 C8orf44Q96CB5 159 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 OR5B2Q96R09 309 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 STACQ99469 402 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 ZNF69Q9UC07 566 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 B3GNT3Q9Y2A9 372 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 PTRH2Q9Y3E5 179 aaKnown RBP12.18□□□□□ -0.46
HMGN1-216ENST00000486741 RIF1Q5UIP0 2472 aaKnown RBP12.18□□□□□ -0.46
HMGN1-216ENST00000486741 LSSP48449 732 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 FNTBP49356 437 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 HMGA2P52926 109 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 MELKQ14680 651 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 VASNQ6EMK4 673 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 ZNF613Q6PF04 617 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 GDPD1Q8N9F7 314 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 TMEM52Q8NDY8 209 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 OR14A2Q96R54 314 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 NCDNQ9UBB6 729 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 FBXL4Q9UKA2 621 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 SLC6A5Q9Y345 797 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 TMEM14AQ9Y6G1 99 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 THSD7BQ9C0I4 1608 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 CENPVL1A0A0U1RR11 272 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 CDC42EP2O14613 210 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 F10P00742 488 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 CCNOP22674 350 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 GRK5P34947 590 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 UGT2B10P36537 528 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 CCR5P51681 352 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 FABP5Q01469 135 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 EEF1A1P5Q5VTE0 462 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 BEST4Q8NFU0 473 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 OR8D4Q8NGM9 314 aa12.18□□□□□ -0.46
HMGN1-216ENST00000486741 FAM174AQ8TBP5 190 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms