RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 SCP2D1Q9UJQ7 156 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 PPM1DO15297 605 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 ZNF780AO75290 641 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-228ENST00000486227 PRR35P0CG20 571 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 RAB3BP20337 219 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 ELAVL4P26378 380 aaKnown RBP10.22□□□□□ -0.77
HDAC6-228ENST00000486227 AGTR1P30556 359 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 HOXD11P31277 338 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-228ENST00000486227 TGFBR1P36897 503 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 YBX1P67809 324 aaKnown RBP10.22□□□□□ -0.77
HDAC6-228ENST00000486227 SFRP4Q6FHJ7 346 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-228ENST00000486227 B3GLCTQ6Y288 498 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 TMEM163Q8TC26 289 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 SPRYD4Q8WW59 207 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-228ENST00000486227 FER1L6-AS2Q96M78 137 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 TXNL4BQ9NX01 149 aaKnown RBP10.22□□□□□ -0.77
HDAC6-228ENST00000486227 EDARQ9UNE0 448 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 KRBOX1C9JBD0 128 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 RGS13O14921 159 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 MBTPS2O43462 519 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 RPS19P39019 145 aaKnown RBP10.22□□□□□ -0.77
HDAC6-228ENST00000486227 GZMKP49863 264 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 GALK2Q01415 458 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 TEKQ02763 1124 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 TLE3Q04726 772 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 EEF1A2Q05639 463 aaKnown RBP10.22□□□□□ -0.77
HDAC6-228ENST00000486227 FAM189A2Q15884 450 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 THRSPQ92748 146 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 DDIT4LQ96D03 193 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 NEDD4LQ96PU5 975 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 OR10A4Q9H209 315 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 RPH3AQ9Y2J0 694 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-228ENST00000486227 SNX11Q9Y5W9 270 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 C5orf51A6NDU8 294 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 OPN1LWP04000 364 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 SLC35E2P0CK97 266 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 BSGP35613 385 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 PLK5Q496M5 336 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 SCGB2B2Q4G0G5 96 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 IL17RDQ8NFM7 739 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 OR5J2Q8NH18 312 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 STOML3Q8TAV4 291 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 TMEM41AQ96HV5 264 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 OR10A5Q9H207 317 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 THSD1Q9NS62 852 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 TESQ9UGI8 421 aaKnown RBP10.22□□□□□ -0.77
HDAC6-228ENST00000486227 NOP16Q9Y3C1 178 aaKnown RBP10.22□□□□□ -0.77
HDAC6-228ENST00000486227 TRBV11-1A0A0K0K1C0 115 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 A0A1W2PPC4 97 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 GAPDHSO14556 408 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-228ENST00000486227 RBBP9O75884 186 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 ZNF432O94892 652 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 KCNK2O95069 426 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 TGM6O95932 706 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 SPNP16150 400 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 CD22P20273 847 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 MAOAP21397 527 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 SSTR2P30874 369 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 RIDAP52758 137 aaKnown RBP10.22□□□□□ -0.77
HDAC6-228ENST00000486227 CAPZA1P52907 286 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 OR1D5P58170 312 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 SOWAHCQ53LP3 525 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-228ENST00000486227 TMEM69Q5SWH9 247 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 OR2G6Q5TZ20 316 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 GLT8D1Q68CQ7 371 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 Q6ZS52 159 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 Q7L0L9 218 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 SYT13Q7L8C5 426 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 ARMC10Q8N2F6 343 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 CCDC54Q8NEL0 328 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 WASH6PQ9NQA3 447 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 DHDHQ9UQ10 334 aa10.22□□□□□ -0.77
HDAC6-228ENST00000486227 SCN4AP35499 1836 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 NAP1L6A6NFF2 107 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 TVP23AA6NH52 213 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 MEN1O00255 615 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 NUPL2O15504 423 aaKnown RBP10.21□□□□□ -0.77
HDAC6-228ENST00000486227 CLUP10909 449 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 ST6GAL1P15907 406 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 TSSK4Q6SA08 328 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 TMED4Q7Z7H5 227 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 RSPRY1Q96DX4 576 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 ARRDC1-AS1Q9H2J1 176 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 RNF167Q9H6Y7 350 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 MUTYHQ9UIF7 546 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 KIF13BQ9NQT8 1826 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 TSPAN11A1L157 253 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 SYT5O00445 386 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 CTNSO60931 367 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 ALDOBP05062 364 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 ZNF43P17038 809 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 ILKQ13418 452 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 DUSP5Q16690 384 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 PRAMEF8Q5VWM4 474 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 PRAMEF7Q5VXH5 474 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 ZFPM2Q8WW38 1151 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 ELF4Q99607 663 aaPredicted RBP10.21□□□□□ -0.77
HDAC6-228ENST00000486227 LMF2Q9BU23 707 aaKnown RBP10.21□□□□□ -0.77
HDAC6-228ENST00000486227 EDEM2Q9BV94 578 aa10.21□□□□□ -0.77
HDAC6-228ENST00000486227 GALNT9Q9HCQ5 603 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms