RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 DEFB108AA8MXU0 73 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 M0R3H8 397 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 ACOT8O14734 319 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 HK1P19367 917 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 STARP49675 285 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 SELENOWP63302 87 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 PPP2R2BQ00005 443 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 EPS8Q12929 822 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 NRF1Q16656 503 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 ZSCAN26Q16670 478 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 OR2A2Q6IF42 318 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 CYP2R1Q6VVX0 501 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 VTCN1Q7Z7D3 282 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 RBM45Q8IUH3 476 aaKnown RBP15.76■□□□□ 0.11
MCF2L-226ENST00000486210 GCNT2Q8N0V5 402 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 MEIOBQ8N635 442 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 FAM86B1Q8N7N1 296 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 TOR1AIP2Q8NFQ8 470 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 OR5M1Q8NGP8 315 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 UTP4Q969X6 686 aaKnown RBP15.76■□□□□ 0.11
MCF2L-226ENST00000486210 MCUR1Q96AQ8 359 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 PERPQ96FX8 193 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 TPD52L3Q96J77 140 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 UCN2Q96RP3 112 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 PRR14Q9BWN1 585 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 PTGES2Q9H7Z7 377 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 DCAF13Q9NV06 445 aaKnown RBP15.76■□□□□ 0.11
MCF2L-226ENST00000486210 ACTR3BQ9P1U1 418 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 SLC7A8Q9UHI5 535 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 VDAC3Q9Y277 283 aa15.76■□□□□ 0.11
MCF2L-226ENST00000486210 MRPS18CQ9Y3D5 142 aaKnown RBP15.76■□□□□ 0.11
MCF2L-226ENST00000486210 CHD3Q12873 2000 aaKnown RBP15.76■□□□□ 0.11
MCF2L-226ENST00000486210 PCNX3Q9H6A9 2034 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 CFAP73A6NFT4 308 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 TPST2O60704 377 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 GMNNO75496 209 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 ZNF682O95780 498 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 NUDT14O95848 222 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 IFNA14P01570 189 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 LINGO3P0C6S8 592 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 PEPDP12955 493 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 LHX2P50458 406 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 SUMO3P55854 103 aaPredicted RBP15.75■□□□□ 0.11
MCF2L-226ENST00000486210 GFRA1P56159 465 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 CBFBQ13951 182 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 QPRTQ15274 297 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 NPTX1Q15818 432 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 ZSWIM7Q19AV6 140 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 PLPPR5Q32ZL2 321 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 BHLHE22Q8NFJ8 381 aaPredicted RBP15.75■□□□□ 0.11
MCF2L-226ENST00000486210 VANGL1Q8TAA9 524 aaPredicted RBP15.75■□□□□ 0.11
MCF2L-226ENST00000486210 POC1BQ8TC44 478 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 ASB9Q96DX5 294 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 NSMCE2Q96MF7 247 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 ARMC7Q9H6L4 198 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 HHATLQ9HCP6 504 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 CLCF1Q9UBD9 225 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 V9GYQ6 96 aa15.75■□□□□ 0.11
MCF2L-226ENST00000486210 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 TNFSF13O75888 250 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 CRHP06850 196 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 C8BP07358 591 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 ZNF708P17019 499 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 HTR2AP28223 471 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 OR1E2P47887 323 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 IDH2P48735 452 aaKnown RBP15.74■□□□□ 0.11
MCF2L-226ENST00000486210 B3GALT5-AS1P59052 145 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 FAM27E3Q08E93 113 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 GANABQ14697 944 aaKnown RBP15.74■□□□□ 0.11
MCF2L-226ENST00000486210 BCL2A1Q16548 175 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 ACKR1Q16570 336 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 RAET1LQ5VY80 246 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 LCN8Q6JVE9 175 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 ZNF550Q7Z398 422 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 DHFR2Q86XF0 187 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 ZNF440Q8IYI8 595 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 OR6T1Q8NGN1 323 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 RASSF5Q8WWW0 418 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 HSH2DQ96JZ2 352 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 WFIKKN1Q96NZ8 548 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 CCL19Q99731 98 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 ADPRHL2Q9NX46 363 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 SLC13A4Q9UKG4 626 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 BAG5Q9UL15 447 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 POMPQ9Y244 141 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 SH3GLB1Q9Y371 365 aa15.74■□□□□ 0.11
MCF2L-226ENST00000486210 TCRBV5S2A0A599 114 aa15.73■□□□□ 0.11
MCF2L-226ENST00000486210 SMNDC1O75940 238 aaKnown RBP eCLIP15.73■□□□□ 0.11
MCF2L-226ENST00000486210 PRKD3O94806 890 aa15.73■□□□□ 0.11
MCF2L-226ENST00000486210 PRKCAP17252 672 aa15.73■□□□□ 0.11
MCF2L-226ENST00000486210 PGCP20142 388 aa15.73■□□□□ 0.11
MCF2L-226ENST00000486210 SLC6A8P48029 635 aa15.73■□□□□ 0.11
MCF2L-226ENST00000486210 ZNF41P51814 821 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-226ENST00000486210 CLDN18P56856 261 aa15.73■□□□□ 0.11
MCF2L-226ENST00000486210 RGS8P57771 180 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-226ENST00000486210 SESN3P58005 492 aa15.73■□□□□ 0.11
MCF2L-226ENST00000486210 TRAP1Q12931 704 aaKnown RBP15.73■□□□□ 0.11
MCF2L-226ENST00000486210 FOXF1Q12946 379 aa15.73■□□□□ 0.11
MCF2L-226ENST00000486210 TMEM44Q2T9K0 475 aa15.73■□□□□ 0.11
MCF2L-226ENST00000486210 TSPYL5Q86VY4 417 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms