RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 OSTF1Q92882 214 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 SMARCD2Q92925 531 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 CPNE4Q96A23 557 aaPredicted RBP3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 PINX1Q96BK5 328 aaKnown RBP3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 LRRC58Q96CX6 371 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 MOCOSQ96EN8 888 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 COQ2Q96H96 371 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 PPP1R16AQ96I34 528 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 CELF6Q96J87 481 aaKnown RBP3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 LRR1Q96L50 414 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 ZNF599Q96NL3 588 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 PGLYRP2Q96PD5 576 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 VPS35Q96QK1 796 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 OR5B2Q96R09 309 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 ZNF559Q9BR84 538 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 TMEM79Q9BSE2 394 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 DCUN1D5Q9BTE7 237 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 MRI1Q9BV20 369 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 HIPK2Q9H2X6 1198 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 PIGUQ9H490 435 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 UBTD1Q9HAC8 227 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 PLGRKTQ9HBL7 147 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 CHMP1AQ9HD42 196 aaPredicted RBP3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 IMP3Q9NV31 184 aaKnown RBP3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 FAIMQ9NVQ4 179 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 MIOSQ9NXC5 875 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 CCDC59Q9P031 241 aaKnown RBP3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 CCDC167Q9P0B6 97 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 KIAA1456Q9P272 454 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 ABI3Q9P2A4 366 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 DKK2Q9UBU2 259 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 COPS7AQ9UBW8 275 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 CLEC4EQ9ULY5 219 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 SCML1Q9UN30 329 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 ST3GAL5Q9UNP4 418 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 SCML2Q9UQR0 700 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 STARD10Q9Y365 291 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 DNAJC15Q9Y5T4 150 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 SNX10Q9Y5X0 201 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 URGCP-MRPS24S4R325 110 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 PTPRDP23468 1912 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 NUP205Q92621 2012 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 TANC1Q9C0D5 1861 aa3.68□□□□□ -1.82
PRPF38B-205ENST00000485810 LOC105369274A0A096LPK9 316 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 CCL15-CCL14A0A0B4J2E2 113 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 LOC102723532A0A0G2JNH3 316 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 A0A0U1RQF3 1178 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 A0A1W2PR77 199 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 ARL5CA6NH57 179 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 OR2AT4A6NND4 320 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 ZAR1LA6NP61 321 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 TMEM238C9JI98 176 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 PPIAL4DF5H284 164 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 KLRC4-KLRK1H3BQV0 150 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 DFFAO00273 331 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 PPP6CO00743 305 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 SOCS2O14508 198 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 CCSO14618 274 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 ARPC2O15144 300 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 OGG1O15527 345 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 TSPAN2O60636 221 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 PMPCBO75439 489 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 CNTN5O94779 1100 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 HPRP00739 348 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 ADAP00813 363 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 IGLV3-27P01718 113 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 RPN2P04844 631 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 HIST1H2ABP04908 130 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 ITGAMP11215 1152 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 SLC2A4P14672 509 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 IL1RNP18510 177 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 HIST1H2ADP20671 130 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 AZGP1P25311 298 aaKnown RBP3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 DDX6P26196 483 aaKnown RBP eCLIP3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 UGT2B10P36537 528 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 TGFBR2P37173 567 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 EIF2S3P41091 472 aaKnown RBP3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 GRIA3P42263 894 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 PTGFRP43088 359 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 IER3P46695 156 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 CAPZBP47756 277 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 ZFP36L2P47974 494 aaKnown RBP3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 MTNR1AP48039 350 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 PTH2RP49190 550 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 MMP15P51511 669 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 TPMTP51580 245 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 RIDAP52758 137 aaKnown RBP3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 STC1P52823 247 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 MVDP53602 400 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 TMBIM6P55061 237 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 CDKN2DP55273 166 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 ESRRGP62508 458 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 ADARB1P78563 741 aaKnown RBP3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 HSD11B2P80365 405 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 SHC2P98077 582 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 PAX5Q02548 391 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 OCA2Q04671 838 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 EMX2Q04743 252 aa3.67□□□□□ -1.82
PRPF38B-205ENST00000485810 DMWDQ09019 674 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms