RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 C1QTNF9P0C862 333 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 DUX4L2P0CJ85 424 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 DUX4L3P0CJ86 424 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 DUX4L4P0CJ87 422 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 DUX4L5P0CJ88 424 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 DUX4L6P0CJ89 424 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 DUX4L7P0CJ90 424 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 CALCBP10092 127 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 ACRP10323 421 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 F3P13726 295 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 GABRA1P14867 456 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 IL9P15248 144 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 RAB3AP20336 220 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 XPAP23025 273 aaPredicted RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 CFPP27918 469 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 GABRR2P28476 465 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 MAT2AP31153 395 aaKnown RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 S100A11P31949 105 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 SSR2P43308 183 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 TSFMP43897 325 aaKnown RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 VEGFCP49767 419 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 GDI2P50395 445 aaKnown RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 ZNF136P52737 540 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 DLX5P56178 289 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 SCAND1P57086 179 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 ERVK-21P61565 698 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 B2MP61769 119 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 RPS11P62280 158 aaKnown RBP eCLIP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 EEF1A1P68104 462 aaKnown RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 CSNK1G2P78368 415 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 TGM3Q08188 693 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 DBPQ10586 325 aaPredicted RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 ILF3Q12906 894 aaKnown RBP eCLIP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 EIF2B5Q13144 721 aaKnown RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 BTN1A1Q13410 526 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 TSTA3Q13630 321 aaPredicted RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 HTR4Q13639 388 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 GK2Q14410 553 aaPredicted RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 HLXQ14774 488 aaPredicted RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 LASP1Q14847 261 aaKnown RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 NR0B2Q15466 257 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 TCTN1Q2MV58 587 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 TMEM255AQ5JRV8 349 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 FAM46CQ5VWP2 391 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 SHEQ5VZ18 495 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 OR4C11Q6IEV9 310 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 FAM180BQ6P0A1 224 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 SLC48A1Q6P1K1 146 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 FAM199XQ6PEV8 388 aaPredicted RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 ZC3H14Q6PJT7 736 aaKnown RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 ZNF793Q6ZN11 406 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 ZNF836Q6ZNA1 936 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 FRRS1Q6ZNA5 592 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 CFAP77Q6ZQR2 320 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 TMPRSS11FQ6ZWK6 438 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 GAREM2Q75VX8 874 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 HIST3H2AQ7L7L0 130 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 OLIG3Q7RTU3 272 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 TRMT11Q7Z4G4 463 aaKnown RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 TMCO2Q7Z6W1 182 aaPredicted RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 C11orf96Q7Z7L8 435 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 RNF180Q86T96 592 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 RANBP3LQ86VV4 465 aaPredicted RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 VRK2Q86Y07 508 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 PM20D2Q8IYS1 436 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 CMTM4Q8IZR5 234 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 LINC00518Q8N0U6 118 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 SLC39A11Q8N1S5 342 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 STPG2Q8N412 459 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 POMGNT2Q8NAT1 580 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 CAMKVQ8NCB2 501 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 CLRN3Q8NCR9 226 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 BEST4Q8NFU0 473 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 OR10H4Q8NGA5 316 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 OR4D9Q8NGE8 314 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 OR6K3Q8NGY3 331 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 OR5J2Q8NH18 312 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 OR1S1Q8NH92 325 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 OR5K2Q8NHB8 316 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 MOSPD2Q8NHP6 518 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 SMAP2Q8WU79 429 aaPredicted RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 TMEM255BQ8WV15 326 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 RAB40AQ8WXH6 277 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 AUTS2Q8WXX7 1259 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 THAP4Q8WY91 577 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 GHSRQ92847 366 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 KLK6Q92876 244 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 HIST1H2ACQ93077 130 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 FBXW5Q969U6 566 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 PNPLA2Q96AD5 504 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 SLC25A38Q96DW6 304 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 NUS1Q96E22 293 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 CNRIP1Q96F85 164 aaPredicted RBP4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 COX14Q96I36 57 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 C4orf36Q96KX1 117 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 CXorf58Q96LI9 332 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 C12orf66Q96MD2 445 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 ZFP3Q96NJ6 502 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 IL17FQ96PD4 163 aa4.31□□□□□ -1.72
SMARCC1-206ENST00000485737 MS4A4EQ96PG1 132 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms