RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 CFLARO15519 480 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 ZNF208O43345 1280 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 CYP7B1O75881 506 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 TROVE2P10155 538 aaKnown RBP eCLIP11.39□□□□□ -0.59
HDAC6-227ENST00000485102 TFPIP10646 304 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 IGFBP5P24593 272 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 MDH1P40925 334 aaKnown RBP11.39□□□□□ -0.59
HDAC6-227ENST00000485102 HTR3AP46098 478 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 PDLIM4P50479 330 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 SLC17A1Q14916 467 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 FAM166AQ6J272 317 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 CCDC103Q8IW40 242 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 FNDC5Q8NAU1 212 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 OR8J2Q8NGG1 315 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 OR5AK3PQ8NH89 298 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 HTRA1Q92743 480 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 PMM1Q92871 262 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 PIF1Q9H611 641 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 MYOZ1Q9NP98 299 aaPredicted RBP11.39□□□□□ -0.59
HDAC6-227ENST00000485102 OBP2BQ9NPH6 170 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 ASIC5Q9NY37 505 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 ZDHHC2Q9UIJ5 367 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 KCNS2Q9ULS6 477 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 PCDHGB4Q9UN71 923 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 SLC9A8Q9Y2E8 581 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 FLVCR1Q9Y5Y0 555 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 ATP23Q9Y6H3 246 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 LOC390937A0A1W2PQ73 354 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 A0A1W2PR80 420 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 SCN2BO60939 215 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 ZNF16P17020 682 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-227ENST00000485102 MPGP29372 298 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 NR4A2P43354 598 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 PRPS1P60891 318 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 RPS26P62854 115 aaKnown RBP11.38□□□□□ -0.59
HDAC6-227ENST00000485102 SLC35A1P78382 337 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 KCNJ10P78508 379 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 EMX2Q04743 252 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 FAM120AOSQ5T036 256 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 TYW3Q6IPR3 259 aaKnown RBP11.38□□□□□ -0.59
HDAC6-227ENST00000485102 C16orf62Q7Z3J2 963 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 ARIH2OSQ8N7S6 290 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 ZNF781Q8N8C0 355 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 ZNF540Q8NDQ6 660 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 OR52E4Q8NGH9 312 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 ZNF563Q8TA94 476 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 TMEM45BQ96B21 275 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 MSI2Q96DH6 328 aaKnown RBP11.38□□□□□ -0.59
HDAC6-227ENST00000485102 C1orf50Q9BV19 199 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 PRR14Q9BWN1 585 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 SLC7A10Q9NS82 523 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 WDR45Q9Y484 360 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 FKBP7Q9Y680 259 aa11.38□□□□□ -0.59
HDAC6-227ENST00000485102 SLC35F4A4IF30 521 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 FAAHO00519 579 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 BCAS1O75363 584 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-227ENST00000485102 PDE5AO76074 875 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 WNT11O96014 354 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 G6PDP11413 515 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 SLC25A3Q00325 362 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 PLAURQ03405 335 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 SQLEQ14534 574 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 ATAD3BQ5T9A4 648 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 TSPO2Q5TGU0 170 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 PAQR6Q6TCH4 344 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 FRRS1Q6ZNA5 592 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 SPATA19Q7Z5L4 167 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 CMIPQ8IY22 773 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 POMGNT2Q8NAT1 580 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 TUBGCP3Q96CW5 907 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 ZG16BQ96DA0 208 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 SLC35G5Q96KT7 338 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 ZNF317Q96PQ6 595 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-227ENST00000485102 SORT1Q99523 831 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 PIMREGQ9BSJ6 248 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 NAA11Q9BSU3 229 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-227ENST00000485102 SF3B5Q9BWJ5 86 aaKnown RBP11.37□□□□□ -0.59
HDAC6-227ENST00000485102 C1QTNF6Q9BXI9 259 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 OR11A1Q9GZK7 315 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 OR51I1Q9H343 314 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 MEAF6Q9HAF1 191 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-227ENST00000485102 NOP53Q9NZM5 478 aaKnown RBP11.37□□□□□ -0.59
HDAC6-227ENST00000485102 UPB1Q9UBR1 384 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 FBXO9Q9UK97 447 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-227ENST00000485102 TRIM33Q9UPN9 1127 aa11.37□□□□□ -0.59
HDAC6-227ENST00000485102 RNF103-CHMP3A0A140T963 221 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 LOC100289279A0A1B0GTE1 492 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 PRSS51A0A1B0GVH4 220 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 ITM2AO43736 263 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 PGRP06401 933 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 VIMP08670 466 aaKnown RBP11.36□□□□□ -0.59
HDAC6-227ENST00000485102 OR12D1P0DN82 309 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 IMPDH2P12268 514 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 LBPP18428 481 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 HNF1AP20823 631 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 UQCRC2P22695 453 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 ARRB2P32121 409 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 SOAT1P35610 550 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 OR2B6P58173 313 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms