RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 EFCAB1Q9HAE3 211 aa17.02■□□□□ 0.32
SNX17-206ENST00000484886 ADPRHL2Q9NX46 363 aa17.02■□□□□ 0.32
SNX17-206ENST00000484886 CCT8L1PA6NM43 557 aa17.01■□□□□ 0.31
SNX17-206ENST00000484886 ZNF724A8MTY0 619 aa17.01■□□□□ 0.31
SNX17-206ENST00000484886 GCM2O75603 506 aaPredicted RBP17.01■□□□□ 0.31
SNX17-206ENST00000484886 AHSA1O95433 338 aa17.01■□□□□ 0.31
SNX17-206ENST00000484886 NUDT2P50583 147 aa17.01■□□□□ 0.31
SNX17-206ENST00000484886 DUSP7Q16829 419 aa17.01■□□□□ 0.31
SNX17-206ENST00000484886 ALG10BQ5I7T1 473 aa17.01■□□□□ 0.31
SNX17-206ENST00000484886 ANKRD34AQ69YU3 496 aa17.01■□□□□ 0.31
SNX17-206ENST00000484886 TFAP2EQ6VUC0 442 aa17.01■□□□□ 0.31
SNX17-206ENST00000484886 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.01■□□□□ 0.31
SNX17-206ENST00000484886 CALHM3Q86XJ0 350 aa17.01■□□□□ 0.31
SNX17-206ENST00000484886 OR2T12Q8NG77 320 aa17.01■□□□□ 0.31
SNX17-206ENST00000484886 VANGL1Q8TAA9 524 aaPredicted RBP17.01■□□□□ 0.31
SNX17-206ENST00000484886 DNAJA4Q8WW22 397 aaPredicted RBP17.01■□□□□ 0.31
SNX17-206ENST00000484886 TAMM41Q96BW9 452 aa17.01■□□□□ 0.31
SNX17-206ENST00000484886 CMTM5Q96DZ9 223 aa17.01■□□□□ 0.31
SNX17-206ENST00000484886 ZC3HAV1LQ96H79 300 aaKnown RBP17.01■□□□□ 0.31
SNX17-206ENST00000484886 POLDIP3Q9BY77 421 aaKnown RBP17.01■□□□□ 0.31
SNX17-206ENST00000484886 USP22Q9UPT9 525 aa17.01■□□□□ 0.31
SNX17-206ENST00000484886 MPDZO75970 2070 aa17■□□□□ 0.31
SNX17-206ENST00000484886 APCP25054 2843 aa17■□□□□ 0.31
SNX17-206ENST00000484886 LIPT2A6NK58 231 aa17■□□□□ 0.31
SNX17-206ENST00000484886 FAM220BPB1ANY3 271 aa17■□□□□ 0.31
SNX17-206ENST00000484886 TMEM229AB2RXF0 380 aa17■□□□□ 0.31
SNX17-206ENST00000484886 GPR171O14626 319 aa17■□□□□ 0.31
SNX17-206ENST00000484886 CTAG2O75638 210 aa17■□□□□ 0.31
SNX17-206ENST00000484886 AKR7A3O95154 331 aa17■□□□□ 0.31
SNX17-206ENST00000484886 LGI1O95970 557 aa17■□□□□ 0.31
SNX17-206ENST00000484886 PNMTP11086 282 aa17■□□□□ 0.31
SNX17-206ENST00000484886 GTF2E2P29084 291 aaKnown RBP17■□□□□ 0.31
SNX17-206ENST00000484886 CCKARP32238 428 aa17■□□□□ 0.31
SNX17-206ENST00000484886 PCYT1AP49585 367 aa17■□□□□ 0.31
SNX17-206ENST00000484886 OR1Q1Q15612 314 aa17■□□□□ 0.31
SNX17-206ENST00000484886 OTUD3Q5T2D3 398 aaPredicted RBP17■□□□□ 0.31
SNX17-206ENST00000484886 ULK3Q6PHR2 472 aa17■□□□□ 0.31
SNX17-206ENST00000484886 LSMEM1Q8N8F7 131 aa17■□□□□ 0.31
SNX17-206ENST00000484886 STK35Q8TDR2 534 aa17■□□□□ 0.31
SNX17-206ENST00000484886 RASSF5Q8WWW0 418 aa17■□□□□ 0.31
SNX17-206ENST00000484886 PROX1Q92786 737 aa17■□□□□ 0.31
SNX17-206ENST00000484886 SLC25A36Q96CQ1 311 aa17■□□□□ 0.31
SNX17-206ENST00000484886 SLC47A1Q96FL8 570 aa17■□□□□ 0.31
SNX17-206ENST00000484886 ZNF583Q96ND8 569 aa17■□□□□ 0.31
SNX17-206ENST00000484886 WFIKKN1Q96NZ8 548 aa17■□□□□ 0.31
SNX17-206ENST00000484886 MCHR1Q99705 422 aa17■□□□□ 0.31
SNX17-206ENST00000484886 MYLK2Q9H1R3 596 aa17■□□□□ 0.31
SNX17-206ENST00000484886 CLEC4MQ9H2X3 399 aaPredicted RBP17■□□□□ 0.31
SNX17-206ENST00000484886 C6orf203Q9P0P8 240 aaPredicted RBP17■□□□□ 0.31
SNX17-206ENST00000484886 ING1Q9UK53 422 aaPredicted RBP17■□□□□ 0.31
SNX17-206ENST00000484886 AP3M1Q9Y2T2 418 aa17■□□□□ 0.31
SNX17-206ENST00000484886 NOSIPQ9Y314 301 aaKnown RBP17■□□□□ 0.31
SNX17-206ENST00000484886 TESMINQ9Y4I5 508 aa17■□□□□ 0.31
SNX17-206ENST00000484886 DCHS2Q6V1P9 2916 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 ZNF814B7Z6K7 855 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 RAMP1O60894 148 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 IFNA14P01570 189 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 C8BP07358 591 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 RPS5P46782 204 aaKnown RBP16.99■□□□□ 0.31
SNX17-206ENST00000484886 VEZF1Q14119 521 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 DAZAP2Q15038 168 aaPredicted RBP16.99■□□□□ 0.31
SNX17-206ENST00000484886 PDK3Q15120 406 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 LRRC23Q53EV4 343 aaPredicted RBP16.99■□□□□ 0.31
SNX17-206ENST00000484886 PAQR6Q6TCH4 344 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 STAC2Q6ZMT1 411 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 CCDC80Q76M96 950 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 CXorf67Q86X51 503 aaPredicted RBP16.99■□□□□ 0.31
SNX17-206ENST00000484886 MICU2Q8IYU8 434 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 UBE2J2Q8N2K1 259 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 GPR32P1Q8NGA4 272 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 ARHGDIGQ99819 225 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 WFDC6Q9BQY6 131 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 C12orf10Q9HB07 376 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 RASSF1Q9NS23 344 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 CMTM6Q9NX76 183 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 ZNF226Q9NYT6 803 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 SLC9A8Q9Y2E8 581 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 ARL2BPQ9Y2Y0 163 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 TEX15Q9BXT5 2789 aa16.99■□□□□ 0.31
SNX17-206ENST00000484886 IGKV3D-15A0A087WSY6 115 aa16.98■□□□□ 0.31
SNX17-206ENST00000484886 CPSF4LA6NMK7 179 aaKnown RBP16.98■□□□□ 0.31
SNX17-206ENST00000484886 ZNF716A6NP11 495 aa16.98■□□□□ 0.31
SNX17-206ENST00000484886 GSTA4O15217 222 aa16.98■□□□□ 0.31
SNX17-206ENST00000484886 CD247P20963 164 aa16.98■□□□□ 0.31
SNX17-206ENST00000484886 PTNP21246 168 aa16.98■□□□□ 0.31
SNX17-206ENST00000484886 OR3A2P47893 321 aa16.98■□□□□ 0.31
SNX17-206ENST00000484886 SLC7A2P52569 658 aa16.98■□□□□ 0.31
SNX17-206ENST00000484886 POU4F3Q15319 338 aa16.98■□□□□ 0.31
SNX17-206ENST00000484886 NRF1Q16656 503 aa16.98■□□□□ 0.31
SNX17-206ENST00000484886 FAM91A1Q658Y4 838 aa16.98■□□□□ 0.31
SNX17-206ENST00000484886 ALKBH2Q6NS38 261 aa16.98■□□□□ 0.31
SNX17-206ENST00000484886 C6orf89Q6UWU4 347 aa16.98■□□□□ 0.31
SNX17-206ENST00000484886 GPAT4Q86UL3 456 aa16.98■□□□□ 0.31
SNX17-206ENST00000484886 P3H2Q8IVL5 708 aa16.98■□□□□ 0.31
SNX17-206ENST00000484886 TMEM99Q8N816 258 aa16.98■□□□□ 0.31
SNX17-206ENST00000484886 SLC38A4Q969I6 547 aa16.98■□□□□ 0.31
SNX17-206ENST00000484886 APH1AQ96BI3 265 aa16.98■□□□□ 0.31
SNX17-206ENST00000484886 HOPXQ9BPY8 73 aaPredicted RBP16.98■□□□□ 0.31
SNX17-206ENST00000484886 PRSS50Q9UI38 385 aa16.98■□□□□ 0.31
SNX17-206ENST00000484886 FBN2P35556 2912 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms