RNA–Protein interactions for RNA: ENST00000484873.6

CAPN8-210, Transcript of calpain 8, humanhuman

TSL 3

Gene CAPN8, Length 364 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-210ENST00000484873 HGFACQ04756 655 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 SLC3A1Q07837 685 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 STX5Q13190 355 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 TRIP13Q15645 432 aaPredicted RBP3.08□□□□□ -1.92
CAPN8-210ENST00000484873 PCGF3Q3KNV8 242 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 ADPRMQ3LIE5 342 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 ESCO2Q56NI9 601 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 CTSL3PQ5NE16 218 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 SEL1L2Q5TEA6 688 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 C11orf63Q6NUN7 778 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 ANKRD16Q6P6B7 361 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 KCTD18Q6PI47 426 aaPredicted RBP3.08□□□□□ -1.92
CAPN8-210ENST00000484873 USP51Q70EK9 711 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 ZNF534Q76KX8 674 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 MOGAT3Q86VF5 341 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 RFX6Q8HWS3 928 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 CCDC50Q8IVM0 306 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 LILRA2Q8N149 483 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 Q8N1X5 172 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 MPP5Q8N3R9 675 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 GTPBP8Q8N3Z3 284 aaPredicted RBP3.08□□□□□ -1.92
CAPN8-210ENST00000484873 KLHL36Q8N4N3 616 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 LSMEM1Q8N8F7 131 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 CDYL2Q8N8U2 506 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 PRELID2Q8N945 189 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 LRRC57Q8N9N7 239 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 SRFBP1Q8NEF9 429 aaKnown RBP3.08□□□□□ -1.92
CAPN8-210ENST00000484873 WDR20Q8TBZ3 569 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 TSEN15Q8WW01 171 aaKnown RBP3.08□□□□□ -1.92
CAPN8-210ENST00000484873 KRT35Q92764 455 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 HOXB13Q92826 284 aaPredicted RBP3.08□□□□□ -1.92
CAPN8-210ENST00000484873 TMBIM1Q969X1 311 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 FAM136AQ96C01 138 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 DNAJA3Q96EY1 480 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 ITCHQ96J02 903 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 MS4A14Q96JA4 679 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 CLPTM1LQ96KA5 538 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 PBKQ96KB5 322 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 OSBPL9Q96SU4 736 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 RHOXF2Q9BQY4 288 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 NUDT16L1Q9BRJ7 211 aaKnown RBP3.08□□□□□ -1.92
CAPN8-210ENST00000484873 FAM167BQ9BTA0 163 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 ITPAQ9BY32 194 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 SRXN1Q9BYN0 137 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 MRPL37Q9BZE1 423 aaKnown RBP3.08□□□□□ -1.92
CAPN8-210ENST00000484873 PITHD1Q9GZP4 211 aaPredicted RBP3.08□□□□□ -1.92
CAPN8-210ENST00000484873 PPA2Q9H2U2 334 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 TMEM185BQ9H7F4 350 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 CXorf21Q9HAI6 301 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 PELI2Q9HAT8 420 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 PRDM7Q9NQW5 492 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 INPP5EQ9NRR6 644 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 ACOXLQ9NUZ1 547 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 SELENONQ9NZV5 590 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 AASSQ9UDR5 926 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 ZNF346Q9UL40 294 aaKnown RBP3.08□□□□□ -1.92
CAPN8-210ENST00000484873 SNX12Q9UMY4 172 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 VDAC3Q9Y277 283 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 SIGLEC9Q9Y336 463 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 ALMS1Q8TCU4 4167 aa3.08□□□□□ -1.92
CAPN8-210ENST00000484873 PCNX3Q9H6A9 2034 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 A0A1B0GVY2 172 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 A0A1W2PRX2 142 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 TCRBV5S2A0A599 114 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 ANKDD1BA6NHY2 528 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 C17orf51A8MQB3 221 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 MIF4GDA9UHW6 222 aaKnown RBP3.07□□□□□ -1.92
CAPN8-210ENST00000484873 C9JVG2 144 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 PDLIM1O00151 329 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 FOXE1O00358 373 aaPredicted RBP3.07□□□□□ -1.92
CAPN8-210ENST00000484873 PFDN6O15212 129 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 TP73O15350 636 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 CD3EAPO15446 510 aaKnown RBP3.07□□□□□ -1.92
CAPN8-210ENST00000484873 PSTPIP1O43586 416 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 CYTIPO60759 359 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 TIPRLO75663 272 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 CDK2AP2O75956 126 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 ANXA2P07355 339 aaKnown RBP3.07□□□□□ -1.92
CAPN8-210ENST00000484873 HIST1H2AGP0C0S8 130 aaPredicted RBP3.07□□□□□ -1.92
CAPN8-210ENST00000484873 HIST1H2ADP20671 130 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 PSMB4P28070 264 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 SHC1P29353 583 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 NOS3P29474 1203 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 CTNNA1P35221 906 aaKnown RBP3.07□□□□□ -1.92
CAPN8-210ENST00000484873 SFTPDP35247 375 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 MAGEB1P43366 347 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 PPICP45877 212 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 PIK3CGP48736 1102 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 CLK3P49761 638 aaKnown RBP3.07□□□□□ -1.92
CAPN8-210ENST00000484873 SEC24CP53992 1094 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 PNLIPRP2P54317 469 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 CORO7P57737 925 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 GNB2P62879 340 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 CCL8P80075 99 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 ROR2Q01974 943 aaKnown RBP3.07□□□□□ -1.92
CAPN8-210ENST00000484873 CKAP4Q07065 602 aaKnown RBP3.07□□□□□ -1.92
CAPN8-210ENST00000484873 SNTB2Q13425 540 aaKnown RBP3.07□□□□□ -1.92
CAPN8-210ENST00000484873 SNX1Q13596 522 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 RAB39AQ14964 217 aa3.07□□□□□ -1.92
CAPN8-210ENST00000484873 WHAMMP3Q1A5X7 153 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms