RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 OR2J2O76002 312 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 SEC14L2O76054 403 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 HMGN1P05114 100 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 GKN3PP0CG01 181 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 CT45A8P0DMV1 189 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 CT45A9P0DMV2 189 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 BMP7P18075 431 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 FPR3P25089 353 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 DCKP27707 260 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 IL12BP29460 328 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 SOX3P41225 446 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 OMPP47874 163 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 GIPRP48546 466 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 TDGF1P3P51864 188 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF136P52737 540 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 TMBIM6P55061 237 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 SLC37A1P57057 533 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 SNRPGP62308 76 aaKnown RBP6.31□□□□□ -1.4
BRCA1-216ENST00000484087 HOXC5Q00444 222 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 FGFBP1Q14512 234 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 GINS1Q14691 196 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 NNATQ16517 81 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 TMEM44Q2T9K0 475 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 CT45A2Q5DJT8 189 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 RNFT1Q5M7Z0 435 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 GPR107Q5VW38 600 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 C1QL3Q5VWW1 255 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 TMEM236Q5W0B7 351 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 C12orf73Q69YU5 71 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 LAIR2Q6ISS4 152 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 RPL13AP3Q6NVV1 102 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 H3F3CQ6NXT2 135 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 NPSR1Q6W5P4 371 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-216ENST00000484087 RPS19BP1Q86WX3 136 aaKnown RBP6.31□□□□□ -1.4
BRCA1-216ENST00000484087 CCDC71Q8IV32 467 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-216ENST00000484087 ERI1Q8IV48 349 aaKnown RBP6.31□□□□□ -1.4
BRCA1-216ENST00000484087 NKAIN4Q8IVV8 208 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 NRMQ8IXM6 262 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 C9orf40Q8IXQ3 194 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 OR4N2Q8NGD1 307 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 OR52L1Q8NGH7 329 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 OR13F1Q8NGS4 319 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 RAB2BQ8WUD1 216 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 TMEM239Q8WW34 195 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 APH1BQ8WW43 257 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 HAS2Q92819 552 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 ISOC1Q96CN7 298 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 FAM46AQ96IP4 442 aaKnown RBP6.31□□□□□ -1.4
BRCA1-216ENST00000484087 MPP4Q96JB8 637 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 GAL3ST4Q96RP7 486 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 LMF1Q96S06 567 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 POLDIP3Q9BY77 421 aaKnown RBP6.31□□□□□ -1.4
BRCA1-216ENST00000484087 DEFB126Q9BYW3 111 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 SLC25A19Q9HC21 320 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 UBQLN4Q9NRR5 601 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 TBC1D23Q9NUY8 699 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF226Q9NYT6 803 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 TVP23BQ9NYZ1 205 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 CNOT2Q9NZN8 540 aaKnown RBP6.31□□□□□ -1.4
BRCA1-216ENST00000484087 LRFN1Q9P244 771 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 ERVK-18Q9QC07 812 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 AASSQ9UDR5 926 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 PSORS1C1Q9UIG5 152 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 ERRFI1Q9UJM3 462 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-216ENST00000484087 RPL36Q9Y3U8 105 aaKnown RBP6.31□□□□□ -1.4
BRCA1-216ENST00000484087 CRYBG3Q68DQ2 2970 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 ICE1Q9Y2F5 2266 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 USP9YO00507 2555 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-216ENST00000484087 TRAV17A0A0B4J275 112 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 CENPVL1A0A0U1RR11 272 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 ANKUB1A6NFN9 424 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 M0R3G1 203 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 GTPBP1O00178 669 aaKnown RBP6.3□□□□□ -1.4
BRCA1-216ENST00000484087 CHP2O43745 196 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 AHCYL1O43865 530 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 REM1O75628 298 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 SLC25A12O75746 678 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 AGFG2O95081 481 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 RCBTB2O95199 551 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 IL33O95760 270 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 FADS2O95864 444 aaKnown RBP6.3□□□□□ -1.4
BRCA1-216ENST00000484087 CSTAP01040 98 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 MT-ND2P03891 347 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 CLPSP04118 112 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 CDK1P06493 297 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 CYC1P08574 325 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 IFI30P13284 250 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 ICAM2P13598 275 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 GABRB1P18505 474 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 FUT4P22083 530 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 PAX7P23759 505 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 PSMB9P28065 219 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 PEX19P40855 299 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 RBM34P42696 430 aaKnown RBP6.3□□□□□ -1.4
BRCA1-216ENST00000484087 PCYT1AP49585 367 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 NRG3P56975 720 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 MLF1P58340 268 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 CDK5Q00535 292 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 EMX1Q04741 257 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms