RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 STK35Q8TDR2 534 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 DNAJA4Q8WW22 397 aaPredicted RBP16.01■□□□□ 0.15
HDAC6-225ENST00000483506 TAMM41Q96BW9 452 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 LURAP1Q96LR2 239 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 WFDC6Q9BQY6 131 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 SLC13A4Q9UKG4 626 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 TESMINQ9Y4I5 508 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 HRNRQ86YZ3 2850 aaPredicted RBP16.01■□□□□ 0.15
HDAC6-225ENST00000483506 FREM1Q5H8C1 2179 aa16■□□□□ 0.15
HDAC6-225ENST00000483506 A0A1B0GWA3 101 aa16■□□□□ 0.15
HDAC6-225ENST00000483506 LIPT2A6NK58 231 aa16■□□□□ 0.15
HDAC6-225ENST00000483506 TPST2O60704 377 aa16■□□□□ 0.15
HDAC6-225ENST00000483506 PRDX6P30041 224 aa16■□□□□ 0.15
HDAC6-225ENST00000483506 IDUAP35475 653 aa16■□□□□ 0.15
HDAC6-225ENST00000483506 BEND4Q6ZU67 534 aa16■□□□□ 0.15
HDAC6-225ENST00000483506 STK32CQ86UX6 486 aa16■□□□□ 0.15
HDAC6-225ENST00000483506 OR52E4Q8NGH9 312 aa16■□□□□ 0.15
HDAC6-225ENST00000483506 RASSF5Q8WWW0 418 aa16■□□□□ 0.15
HDAC6-225ENST00000483506 CMTM5Q96DZ9 223 aa16■□□□□ 0.15
HDAC6-225ENST00000483506 ZNF300Q96RE9 604 aaPredicted RBP16■□□□□ 0.15
HDAC6-225ENST00000483506 HOPXQ9BPY8 73 aaPredicted RBP16■□□□□ 0.15
HDAC6-225ENST00000483506 EFCAB1Q9HAE3 211 aa16■□□□□ 0.15
HDAC6-225ENST00000483506 A0A0B4J2E0 115 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 A0A1B0GX12 115 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 SH3D21A4FU49 640 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 A6NNC1 897 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 ZNF814B7Z6K7 855 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 C16orf97H3BN30 126 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 CTAG2O75638 210 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 OPN1SWP03999 348 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 GPIP06744 558 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 PNMTP11086 282 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 OR2B6P58173 313 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 KRTAP10-9P60411 292 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 EGR4Q05215 589 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 BNIP2Q12982 314 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 SWT1Q5T5J6 900 aaKnown RBP15.99■□□□□ 0.15
HDAC6-225ENST00000483506 C1orf140Q5VVS0 124 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 ULK3Q6PHR2 472 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 C5orf46Q6UWT4 87 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 RANBP3LQ86VV4 465 aaPredicted RBP15.99■□□□□ 0.15
HDAC6-225ENST00000483506 LSRQ86X29 649 aaPredicted RBP15.99■□□□□ 0.15
HDAC6-225ENST00000483506 SLC15A3Q8IY34 581 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 GABRG1Q8N1C3 465 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 SLC38A4Q969I6 547 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 PCDHAC1Q9H158 963 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 OR10A4Q9H209 315 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 PIF1Q9H611 641 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 C12orf49Q9H741 205 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 FANCFQ9NPI8 374 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 CMTM6Q9NX76 183 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 FAM53CQ9NYF3 392 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 EMC3Q9P0I2 261 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 RPS6KB2Q9UBS0 482 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 NDRG3Q9UGV2 375 aa15.99■□□□□ 0.15
HDAC6-225ENST00000483506 ABCA4P78363 2273 aa15.98■□□□□ 0.15
HDAC6-225ENST00000483506 GPR171O14626 319 aa15.98■□□□□ 0.15
HDAC6-225ENST00000483506 AIM2O14862 343 aa15.98■□□□□ 0.15
HDAC6-225ENST00000483506 RAMP1O60894 148 aa15.98■□□□□ 0.15
HDAC6-225ENST00000483506 ANKRD17O75179 2603 aaKnown RBP15.98■□□□□ 0.15
HDAC6-225ENST00000483506 FPR1P21462 350 aa15.98■□□□□ 0.15
HDAC6-225ENST00000483506 OR3A2P47893 321 aa15.98■□□□□ 0.15
HDAC6-225ENST00000483506 NCALDP61601 193 aa15.98■□□□□ 0.15
HDAC6-225ENST00000483506 OR1Q1Q15612 314 aa15.98■□□□□ 0.15
HDAC6-225ENST00000483506 NPTX1Q15818 432 aa15.98■□□□□ 0.15
HDAC6-225ENST00000483506 ALG10BQ5I7T1 473 aa15.98■□□□□ 0.15
HDAC6-225ENST00000483506 STAC2Q6ZMT1 411 aa15.98■□□□□ 0.15
HDAC6-225ENST00000483506 GALNT5Q7Z7M9 940 aa15.98■□□□□ 0.15
HDAC6-225ENST00000483506 CCDC103Q8IW40 242 aa15.98■□□□□ 0.15
HDAC6-225ENST00000483506 OR2T12Q8NG77 320 aa15.98■□□□□ 0.15
HDAC6-225ENST00000483506 DNAJA3Q96EY1 480 aa15.98■□□□□ 0.15
HDAC6-225ENST00000483506 NAA11Q9BSU3 229 aaPredicted RBP15.98■□□□□ 0.15
HDAC6-225ENST00000483506 PTDSS2Q9BVG9 487 aa15.98■□□□□ 0.15
HDAC6-225ENST00000483506 TMEM27Q9HBJ8 222 aa15.98■□□□□ 0.15
HDAC6-225ENST00000483506 RASSF1Q9NS23 344 aa15.98■□□□□ 0.15
HDAC6-225ENST00000483506 USP22Q9UPT9 525 aa15.98■□□□□ 0.15
HDAC6-225ENST00000483506 ARL2BPQ9Y2Y0 163 aa15.98■□□□□ 0.15
HDAC6-225ENST00000483506 SPG11Q96JI7 2443 aa15.98■□□□□ 0.15
HDAC6-225ENST00000483506 AQP7P3A6NL99 342 aa15.97■□□□□ 0.15
HDAC6-225ENST00000483506 ELOA3DA6NLF2 546 aaPredicted RBP15.97■□□□□ 0.15
HDAC6-225ENST00000483506 CCT8L1PA6NM43 557 aa15.97■□□□□ 0.15
HDAC6-225ENST00000483506 FTCDNL1E5RQL4 147 aa15.97■□□□□ 0.15
HDAC6-225ENST00000483506 M0R3H8 397 aa15.97■□□□□ 0.15
HDAC6-225ENST00000483506 CNOT4O95628 575 aaKnown RBP15.97■□□□□ 0.15
HDAC6-225ENST00000483506 PSMB1P20618 241 aaKnown RBP15.97■□□□□ 0.15
HDAC6-225ENST00000483506 P2RY4P51582 365 aa15.97■□□□□ 0.15
HDAC6-225ENST00000483506 CEACAM7Q14002 265 aa15.97■□□□□ 0.15
HDAC6-225ENST00000483506 SLC17A1Q14916 467 aa15.97■□□□□ 0.15
HDAC6-225ENST00000483506 EXOC3L2Q2M3D2 409 aa15.97■□□□□ 0.15
HDAC6-225ENST00000483506 ELOA3BQ3SY89 546 aa15.97■□□□□ 0.15
HDAC6-225ENST00000483506 ZNF613Q6PF04 617 aa15.97■□□□□ 0.15
HDAC6-225ENST00000483506 MICU2Q8IYU8 434 aa15.97■□□□□ 0.15
HDAC6-225ENST00000483506 ANKS4BQ8N8V4 417 aa15.97■□□□□ 0.15
HDAC6-225ENST00000483506 ELOA3Q8NG57 546 aa15.97■□□□□ 0.15
HDAC6-225ENST00000483506 OR6T1Q8NGN1 323 aa15.97■□□□□ 0.15
HDAC6-225ENST00000483506 MFSD8Q8NHS3 518 aa15.97■□□□□ 0.15
HDAC6-225ENST00000483506 SLC47A1Q96FL8 570 aa15.97■□□□□ 0.15
HDAC6-225ENST00000483506 SF3B5Q9BWJ5 86 aaKnown RBP15.97■□□□□ 0.15
HDAC6-225ENST00000483506 PRR14Q9BWN1 585 aa15.97■□□□□ 0.15
HDAC6-225ENST00000483506 ABCD2Q9UBJ2 740 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms