RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 LYRM4Q9HD34 91 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 RAB18Q9NP72 206 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 DMAP1Q9NPF5 467 aaPredicted RBP2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 DUS2Q9NX74 493 aaKnown RBP2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 RCOR3Q9P2K3 495 aaPredicted RBP2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 MBD2Q9UBB5 411 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 CTSFQ9UBX1 484 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 CLN8Q9UBY8 286 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 ANAPC7Q9UJX3 599 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 NUP50Q9UKX7 468 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 FLVCR2Q9UPI3 526 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 ZNF256Q9Y2P7 627 aaPredicted RBP2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 KLHDC2Q9Y2U9 406 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 MROH7-TTC4A0A0A0MT08 1334 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 NEDD4P46934 1319 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 USP47Q96K76 1375 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 NEURL4Q96JN8 1562 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 SBNO1A3KN83 1393 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 FRMPD4Q14CM0 1322 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 A0A0J9YVX5 310 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 SH3PXD2BA1X283 911 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 GLTPD2A6NH11 291 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 E7EWF7 191 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 WWP2O00308 870 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 CYB561D2O14569 222 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 IMPA2O14732 288 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 SURF4O15260 269 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 CLOCKO15516 846 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 KDELR3O43731 214 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 RAMP1O60894 148 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 CBR3O75828 277 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 ANXA9O76027 345 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 CDK14O94921 469 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 IGSF6O95976 241 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 IGHG3P01860 377 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 ALDOBP05062 364 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 GTF2E2P29084 291 aaKnown RBP2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 IFNA8P32881 189 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 HPCAL1P37235 193 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 P2RY1P47900 373 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 UQCRFS1P47985 274 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 MRPL19P49406 292 aaKnown RBP2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 MRPS15P82914 257 aaKnown RBP2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 CDK16Q00536 496 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 FKBP3Q00688 224 aaKnown RBP2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 EWSR1Q01844 656 aaKnown RBP eCLIP2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 CDH17Q12864 832 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 GPR176Q14439 515 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 GRB7Q14451 532 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 NCF4Q15080 339 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 ALKBH6Q3KRA9 238 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 PRR30Q53SZ7 412 aaPredicted RBP2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 SPANXN4Q5MJ08 99 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 FAM182AQ5T1J6 154 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 SLX4IPQ5VYV7 408 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 ATRAIDQ6UW56 229 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 Q71RC1 249 aaPredicted RBP2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 APTXQ7Z2E3 356 aaKnown RBP2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 DHDDSQ86SQ9 333 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 SERPINA9Q86WD7 417 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 RBM45Q8IUH3 476 aaKnown RBP2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 MMAAQ8IVH4 418 aaKnown RBP2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 SLC22A15Q8IZD6 547 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 C17orf78Q8N4C9 275 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 ZSCAN4Q8NAM6 433 aaPredicted RBP2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 FNDC5Q8NAU1 212 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 TMEM104Q8NE00 496 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 FBXL13Q8NEE6 735 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 PROKR2Q8NFJ6 384 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 OR9G4Q8NGQ1 327 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 OR6F1Q8NGZ6 308 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 ZNF596Q8TC21 504 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 MAGEE2Q8TD90 523 aaPredicted RBP2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 GPR148Q8TDV2 347 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 ACMSDQ8TDX5 336 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 IL1F10Q8WWZ1 152 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 NRGNQ92686 78 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 TOP1MTQ969P6 601 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 MRPL24Q96A35 216 aaKnown RBP2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 ADIPOR1Q96A54 375 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 CCDC124Q96CT7 223 aaKnown RBP2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 GLT1D1Q96MS3 346 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 ZIM3Q96PE6 472 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 SLC38A2Q96QD8 506 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 MTMR9Q96QG7 549 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 SLC6A7Q99884 636 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 NIPSNAP3BQ9BS92 247 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 CCDC28BQ9BUN5 200 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 PAPOLGQ9BWT3 736 aaKnown RBP2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 ANKRD19PQ9H560 264 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 ALG9Q9H6U8 611 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 JPT2Q9H910 190 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 CCNB1IP1Q9NPC3 277 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 MYOZ2Q9NPC6 264 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 DYRK4Q9NR20 520 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 DCAF13Q9NV06 445 aaKnown RBP2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 BFARQ9NZS9 450 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 ADAM22Q9P0K1 906 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 EXOSC1Q9Y3B2 195 aaKnown RBP2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 RHBDD3Q9Y3P4 386 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms