RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 CENPHQ9H3R5 247 aa7.93□□□□□ -1.14
HLA-B-253ENST00000481849 ROPN1Q9HAT0 212 aaPredicted RBP7.93□□□□□ -1.14
HLA-B-253ENST00000481849 ACER3Q9NUN7 267 aa7.93□□□□□ -1.14
HLA-B-253ENST00000481849 NPAP1Q9NZP6 1156 aa7.93□□□□□ -1.14
HLA-B-253ENST00000481849 EMC3Q9P0I2 261 aa7.93□□□□□ -1.14
HLA-B-253ENST00000481849 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.93□□□□□ -1.14
HLA-B-253ENST00000481849 NOSIPQ9Y314 301 aaKnown RBP7.93□□□□□ -1.14
HLA-B-253ENST00000481849 WDR45Q9Y484 360 aa7.93□□□□□ -1.14
HLA-B-253ENST00000481849 V9GYY5 206 aaPredicted RBP7.93□□□□□ -1.14
HLA-B-253ENST00000481849 ZNF716A6NP11 495 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 ZNF724A8MTY0 619 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 SHISA9B4DS77 424 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 ETV2O00321 342 aaPredicted RBP7.92□□□□□ -1.14
HLA-B-253ENST00000481849 RNASET2O00584 256 aaKnown RBP7.92□□□□□ -1.14
HLA-B-253ENST00000481849 AP3D1O14617 1153 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 SSX4O60224 188 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 KIAA0513O60268 411 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 TMCC2O75069 709 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 CD8AP01732 235 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 TP53P04637 393 aaPredicted RBP7.92□□□□□ -1.14
HLA-B-253ENST00000481849 SERPINE1P05121 402 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 BGNP21810 368 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 UQCRC2P22695 453 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 SLC1A6P48664 564 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 KHKP50053 298 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 FOXG1P55316 489 aaPredicted RBP7.92□□□□□ -1.14
HLA-B-253ENST00000481849 OR2B6P58173 313 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 PHC1P78364 1004 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 HPCAP84074 193 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 SPOCK1Q08629 439 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 FUT5Q11128 374 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 KRT71Q3SY84 523 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 SPANXN4Q5MJ08 99 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 TIMM23BQ5SRD1 257 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 ANXA8L1Q5VT79 327 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 FBXW9Q5XUX1 488 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 ABLIM2Q6H8Q1 611 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 EMBQ6PCB8 327 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 FRRS1Q6ZNA5 592 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 MTDHQ86UE4 582 aaKnown RBP7.92□□□□□ -1.14
HLA-B-253ENST00000481849 ZNF433Q8N7K0 673 aaPredicted RBP7.92□□□□□ -1.14
HLA-B-253ENST00000481849 ANKFN1Q8N957 763 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 VPS37AQ8NEZ2 397 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 AENQ8WTP8 325 aaKnown RBP7.92□□□□□ -1.14
HLA-B-253ENST00000481849 CNOT9Q92600 299 aaKnown RBP7.92□□□□□ -1.14
HLA-B-253ENST00000481849 ZHX1-C8orf76Q96EF9 292 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 ARL5BQ96KC2 179 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 SLC35A5Q9BS91 424 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 TRAF4Q9BUZ4 470 aaPredicted RBP7.92□□□□□ -1.14
HLA-B-253ENST00000481849 CCDC106Q9BWC9 280 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 NUF2Q9BZD4 464 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 C20orf27Q9GZN8 174 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 YAE1D1Q9NRH1 226 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 ASIC5Q9NY37 505 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 MARCOQ9UEW3 520 aaPredicted RBP7.92□□□□□ -1.14
HLA-B-253ENST00000481849 CHRNA9Q9UGM1 479 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 POU2F3Q9UKI9 436 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 SLC35A3Q9Y2D2 325 aa7.92□□□□□ -1.14
HLA-B-253ENST00000481849 PRSS51A0A1B0GVH4 220 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 PRAMEF27A3QJZ7 478 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 OR5H1A6NKK0 313 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 RNF212BA8MTL3 300 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 E7EQL1 145 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 M0R1B8 84 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 RGS16O15492 202 aaPredicted RBP7.91□□□□□ -1.14
HLA-B-253ENST00000481849 DNAJA2O60884 412 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 SCN2BO60939 215 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 CRLF1O75462 422 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 AGR2O95994 175 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 GSNP06396 782 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 MYZAPP0CAP1 466 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 LBPP18428 481 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 COX5AP20674 150 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 S100A3P33764 101 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 NTF4P34130 210 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 APOBEC1P41238 236 aaKnown RBP7.91□□□□□ -1.14
HLA-B-253ENST00000481849 IDH2P48735 452 aaKnown RBP7.91□□□□□ -1.14
HLA-B-253ENST00000481849 RPL14P50914 215 aaKnown RBP7.91□□□□□ -1.14
HLA-B-253ENST00000481849 KCNJ10P78508 379 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 RUNX1T1Q06455 604 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 ETFDHQ16134 617 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 SYPL1Q16563 259 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 SMU1Q2TAY7 513 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 FAM174BQ3ZCQ3 159 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 SAXO2Q658L1 398 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 HEPHL1Q6MZM0 1159 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 SLC22A25Q6T423 547 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 TMEM108Q6UXF1 575 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 CASP12Q6UXS9 341 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 GRINAQ7Z429 371 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 RNF130Q86XS8 419 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 ADGRG3Q86Y34 549 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 ARFGAP2Q8N6H7 521 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 OR8J2Q8NGG1 315 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 OR52E4Q8NGH9 312 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 PNPT1Q8TCS8 783 aaKnown RBP7.91□□□□□ -1.14
HLA-B-253ENST00000481849 MIPOL1Q8TD10 442 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 SLC25A43Q8WUT9 341 aaPredicted RBP7.91□□□□□ -1.14
HLA-B-253ENST00000481849 SORT1Q99523 831 aa7.91□□□□□ -1.14
HLA-B-253ENST00000481849 PAIP2Q9BPZ3 127 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms