RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 C1orf94Q6P1W5 598 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 NHLRC1Q6VVB1 395 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 C15orf54Q8N8G6 183 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 WFIKKN2Q8TEU8 576 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 RLN3Q8WXF3 142 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 CPNE4Q96A23 557 aaPredicted RBP12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 RAB7BQ96AH8 199 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 GINS4Q9BRT9 223 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 SEC11CQ9BY50 192 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 QRSL1Q9H0R6 528 aaKnown RBP12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 BRF2Q9HAW0 419 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 TRIM36Q9NQ86 728 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 MED17Q9NVC6 651 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 KLHL42Q9P2K6 505 aa12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 ZNF106Q9H2Y7 1883 aaKnown RBP12.16□□□□□ -0.46
CNKSR3-204ENST00000479339 A0A1B0GWJ7 208 aa12.15□□□□□ -0.46
CNKSR3-204ENST00000479339 DRGXA6NNA5 263 aa12.15□□□□□ -0.46
CNKSR3-204ENST00000479339 GDF9O60383 454 aa12.15□□□□□ -0.46
CNKSR3-204ENST00000479339 CLN5O75503 358 aa12.15□□□□□ -0.46
CNKSR3-204ENST00000479339 UBXN7O94888 489 aa12.15□□□□□ -0.46
CNKSR3-204ENST00000479339 NDUFB6O95139 128 aa12.15□□□□□ -0.46
CNKSR3-204ENST00000479339 EPHX1P07099 455 aa12.15□□□□□ -0.46
CNKSR3-204ENST00000479339 ANXA4P09525 319 aaPredicted RBP12.15□□□□□ -0.46
CNKSR3-204ENST00000479339 ADCYAP1P18509 176 aa12.15□□□□□ -0.46
CNKSR3-204ENST00000479339 NOS3P29474 1203 aa12.15□□□□□ -0.46
CNKSR3-204ENST00000479339 CCR7P32248 378 aa12.15□□□□□ -0.46
CNKSR3-204ENST00000479339 RPIAP49247 311 aa12.15□□□□□ -0.46
CNKSR3-204ENST00000479339 ART1P52961 327 aa12.15□□□□□ -0.46
CNKSR3-204ENST00000479339 HBA1P69905 142 aa12.15□□□□□ -0.46
CNKSR3-204ENST00000479339 SLC3A1Q07837 685 aa12.15□□□□□ -0.46
CNKSR3-204ENST00000479339 PON3Q15166 354 aa12.15□□□□□ -0.46
CNKSR3-204ENST00000479339 UBE2NLQ5JXB2 153 aa12.15□□□□□ -0.46
CNKSR3-204ENST00000479339 HENMT1Q5T8I9 393 aaKnown RBP12.15□□□□□ -0.46
CNKSR3-204ENST00000479339 SLC7A13Q8TCU3 470 aa12.15□□□□□ -0.46
CNKSR3-204ENST00000479339 MFRPQ9BY79 579 aa12.15□□□□□ -0.46
CNKSR3-204ENST00000479339 KLHL9Q9P2J3 617 aa12.15□□□□□ -0.46
CNKSR3-204ENST00000479339 LOC390937A0A1W2PQ73 354 aa12.15□□□□□ -0.47
CNKSR3-204ENST00000479339 KANTRA0A1W2PQU2 76 aa12.15□□□□□ -0.47
CNKSR3-204ENST00000479339 ATP1B1P05026 303 aa12.15□□□□□ -0.47
CNKSR3-204ENST00000479339 ZNF35P13682 527 aa12.15□□□□□ -0.47
CNKSR3-204ENST00000479339 NDUFV2P19404 249 aa12.15□□□□□ -0.47
CNKSR3-204ENST00000479339 MMP11P24347 488 aa12.15□□□□□ -0.47
CNKSR3-204ENST00000479339 TAS2R43P59537 309 aa12.15□□□□□ -0.47
CNKSR3-204ENST00000479339 UAP1L1Q3KQV9 507 aa12.15□□□□□ -0.47
CNKSR3-204ENST00000479339 TMEM215Q68D42 235 aa12.15□□□□□ -0.47
CNKSR3-204ENST00000479339 OR7E24Q6IFN5 339 aa12.15□□□□□ -0.47
CNKSR3-204ENST00000479339 PXKQ7Z7A4 578 aa12.15□□□□□ -0.47
CNKSR3-204ENST00000479339 NAA40Q86UY6 237 aa12.15□□□□□ -0.47
CNKSR3-204ENST00000479339 ZNF561Q8N587 486 aa12.15□□□□□ -0.47
CNKSR3-204ENST00000479339 DNAAF1Q8NEP3 725 aa12.15□□□□□ -0.47
CNKSR3-204ENST00000479339 NR4A3Q92570 626 aa12.15□□□□□ -0.47
CNKSR3-204ENST00000479339 FAM117AQ9C073 453 aa12.15□□□□□ -0.47
CNKSR3-204ENST00000479339 TMPRSS5Q9H3S3 457 aa12.15□□□□□ -0.47
CNKSR3-204ENST00000479339 SMOC1Q9H4F8 434 aa12.15□□□□□ -0.47
CNKSR3-204ENST00000479339 AUNIPQ9H7T9 357 aa12.15□□□□□ -0.47
CNKSR3-204ENST00000479339 PLXND1Q9Y4D7 1925 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 TRAV1-2A0A0B4J238 106 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 WASH3PC4AMC7 463 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 TMEM127O75204 238 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 ZNF217O75362 1048 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 AKR7A3O95154 331 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 KLK3P07288 261 aaPredicted RBP12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 AOAHP28039 575 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 HTR1FP30939 366 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 CSF2RBP32927 897 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 DHPSP49366 369 aaPredicted RBP12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 SGSHP51688 502 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 RIDAP52758 137 aaKnown RBP12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 ARFIP1P53367 373 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 OR10A3P58181 314 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 AP1S1P61966 158 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 ACER2Q5QJU3 275 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 FAM111BQ6SJ93 734 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 MBOAT1Q6ZNC8 495 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 KCNRGQ8N5I3 272 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 FRMD1Q8N878 549 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 RNASE11Q8TAA1 199 aaKnown RBP12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 LKAAEAR1Q8TD35 194 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 BRIX1Q8TDN6 353 aaKnown RBP12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 PIGKQ92643 395 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 MRGPRX1Q96LB2 322 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 TMEM68Q96MH6 324 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 ZDHHC5Q9C0B5 715 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 REEP4Q9H6H4 257 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 A4GALTQ9NPC4 353 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 TMEM138Q9NPI0 162 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 PCDHB10Q9UN67 800 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 SPAG17Q6Q759 2223 aa12.14□□□□□ -0.47
CNKSR3-204ENST00000479339 IGHV1OR15-9A0A0B4J2B8 117 aa12.13□□□□□ -0.47
CNKSR3-204ENST00000479339 ANKRD20A5PA0PJZ0 165 aa12.13□□□□□ -0.47
CNKSR3-204ENST00000479339 COLCA2A8K830 154 aa12.13□□□□□ -0.47
CNKSR3-204ENST00000479339 ANKRD66B4E2M5 251 aa12.13□□□□□ -0.47
CNKSR3-204ENST00000479339 BCL2L11O43521 198 aa12.13□□□□□ -0.47
CNKSR3-204ENST00000479339 TBL1XO60907 577 aa12.13□□□□□ -0.47
CNKSR3-204ENST00000479339 OR2F2O95006 317 aa12.13□□□□□ -0.47
CNKSR3-204ENST00000479339 C8GP07360 202 aa12.13□□□□□ -0.47
CNKSR3-204ENST00000479339 GKN3PP0CG01 181 aa12.13□□□□□ -0.47
CNKSR3-204ENST00000479339 ACVRL1P37023 503 aa12.13□□□□□ -0.47
CNKSR3-204ENST00000479339 IFNGR2P38484 337 aa12.13□□□□□ -0.47
CNKSR3-204ENST00000479339 PMELP40967 661 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms