RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 TRIML2Q8N7C3 387 aa11.61□□□□□ -0.55
VCL-205ENST00000478896 CNOT9Q92600 299 aaKnown RBP11.61□□□□□ -0.55
VCL-205ENST00000478896 PANX1Q96RD7 426 aa11.61□□□□□ -0.55
VCL-205ENST00000478896 KCNS3Q9BQ31 491 aa11.61□□□□□ -0.55
VCL-205ENST00000478896 NUF2Q9BZD4 464 aa11.61□□□□□ -0.55
VCL-205ENST00000478896 AMBRA1Q9C0C7 1298 aa11.61□□□□□ -0.55
VCL-205ENST00000478896 SHARPINQ9H0F6 387 aa11.61□□□□□ -0.55
VCL-205ENST00000478896 OSGIN1Q9UJX0 560 aa11.61□□□□□ -0.55
VCL-205ENST00000478896 RAP2CQ9Y3L5 183 aa11.61□□□□□ -0.55
VCL-205ENST00000478896 CFAP73A6NFT4 308 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 ATP6V1G2-DDX39BF2Z307 99 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 PDLIM1O00151 329 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 HMGN4O00479 90 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 KRT33AO76009 404 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 LY6HO94772 140 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 USF1P22415 310 aaPredicted RBP11.6□□□□□ -0.55
VCL-205ENST00000478896 MPGP29372 298 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 RPL14P50914 215 aaKnown RBP11.6□□□□□ -0.55
VCL-205ENST00000478896 NME5P56597 212 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 H3F3AP84243 136 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 SLC25A3Q00325 362 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 PLAURQ03405 335 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 SLC17A1Q14916 467 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 OR7A5Q15622 319 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 SYPL1Q16563 259 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 MRPL2Q5T653 305 aaKnown RBP11.6□□□□□ -0.55
VCL-205ENST00000478896 PAQR6Q6TCH4 344 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 AAED1Q7RTV5 226 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 ABHD12BQ7Z5M8 362 aaPredicted RBP11.6□□□□□ -0.55
VCL-205ENST00000478896 GPAT4Q86UL3 456 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 KIRREL3Q8IZU9 778 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 ANKFN1Q8N957 763 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 WDR31Q8NA23 367 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 C10orf105Q8TEF2 133 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 NANOS1Q8WY41 292 aaKnown RBP11.6□□□□□ -0.55
VCL-205ENST00000478896 PROX1Q92786 737 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 FBXO17Q96EF6 278 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 TMEM160Q9NX00 188 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 MOKQ9UQ07 419 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 PLCE1Q9P212 2302 aa11.6□□□□□ -0.55
VCL-205ENST00000478896 ZC3H12DA2A288 527 aaKnown RBP11.59□□□□□ -0.55
VCL-205ENST00000478896 PRAMEF27A3QJZ7 478 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 AGAP5A6NIR3 686 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 LMX1BO60663 402 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 AKR7A3O95154 331 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 GPIP06744 558 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 CHRM4P08173 479 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 IGHV4-31P0DP07 118 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 NR2F1P10589 423 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 SLC1A3P43003 542 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 SLC1A6P48664 564 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 PDLIM4P50479 330 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 MAP2K6P52564 334 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 SNRPD2P62316 118 aaKnown RBP11.59□□□□□ -0.55
VCL-205ENST00000478896 VSNL1P62760 191 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 LSM11P83369 360 aaKnown RBP eCLIP11.59□□□□□ -0.55
VCL-205ENST00000478896 TXNL4AP83876 142 aaKnown RBP11.59□□□□□ -0.55
VCL-205ENST00000478896 EPS8Q12929 822 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 CEACAM7Q14002 265 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 GGTLC2Q14390 218 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 CARTPTQ16568 116 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 LRRC74BQ6ZQY2 392 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 PEX5LQ8IYB4 626 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 POMGNT2Q8NAT1 580 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 OR9K2Q8NGE7 335 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 PNPT1Q8TCS8 783 aaKnown RBP11.59□□□□□ -0.55
VCL-205ENST00000478896 TMEM45BQ96B21 275 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 C3orf49Q96BT1 292 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 CCDC115Q96NT0 180 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 TRNT1Q96Q11 434 aaKnown RBP11.59□□□□□ -0.55
VCL-205ENST00000478896 PIMREGQ9BSJ6 248 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 TAPBPLQ9BX59 468 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 SLC38A1Q9H2H9 487 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 CHODLQ9H9P2 273 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 BTNL2Q9UIR0 455 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 KCNS2Q9ULS6 477 aa11.59□□□□□ -0.55
VCL-205ENST00000478896 CCDC154A6NI56 674 aa11.58□□□□□ -0.56
VCL-205ENST00000478896 KLF11O14901 512 aa11.58□□□□□ -0.56
VCL-205ENST00000478896 SNUPNO95149 360 aaKnown RBP11.58□□□□□ -0.56
VCL-205ENST00000478896 C1QCP02747 245 aa11.58□□□□□ -0.56
VCL-205ENST00000478896 DBIP07108 87 aaKnown RBP11.58□□□□□ -0.56
VCL-205ENST00000478896 CXCR1P25024 350 aa11.58□□□□□ -0.56
VCL-205ENST00000478896 GZMKP49863 264 aa11.58□□□□□ -0.56
VCL-205ENST00000478896 UBE2NP61088 152 aaKnown RBP11.58□□□□□ -0.56
VCL-205ENST00000478896 KRT71Q3SY84 523 aa11.58□□□□□ -0.56
VCL-205ENST00000478896 HIKESHIQ53FT3 197 aa11.58□□□□□ -0.56
VCL-205ENST00000478896 C1QTNF12Q5T7M4 302 aa11.58□□□□□ -0.56
VCL-205ENST00000478896 FAM166AQ6J272 317 aa11.58□□□□□ -0.56
VCL-205ENST00000478896 ZNF621Q6ZSS3 439 aa11.58□□□□□ -0.56
VCL-205ENST00000478896 SLC46A3Q7Z3Q1 461 aa11.58□□□□□ -0.56
VCL-205ENST00000478896 ZNF440Q8IYI8 595 aa11.58□□□□□ -0.56
VCL-205ENST00000478896 CADM2Q8N3J6 435 aa11.58□□□□□ -0.56
VCL-205ENST00000478896 TMEM99Q8N816 258 aa11.58□□□□□ -0.56
VCL-205ENST00000478896 AURKBQ96GD4 344 aaPredicted RBP11.58□□□□□ -0.56
VCL-205ENST00000478896 ZNF385AQ96PM9 386 aaKnown RBP11.58□□□□□ -0.56
VCL-205ENST00000478896 ALKBH3Q96Q83 286 aaPredicted RBP11.58□□□□□ -0.56
VCL-205ENST00000478896 SORT1Q99523 831 aa11.58□□□□□ -0.56
VCL-205ENST00000478896 VRK1Q99986 396 aaPredicted RBP11.58□□□□□ -0.56
VCL-205ENST00000478896 SF3B5Q9BWJ5 86 aaKnown RBP11.58□□□□□ -0.56
VCL-205ENST00000478896 C20orf27Q9GZN8 174 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms