RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 LANCL3Q6ZV70 420 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 MAMDC2Q7Z304 686 aaPredicted RBP7.24□□□□□ -1.25
VMA21-203ENST00000477649 ATCAYQ86WG3 371 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 OR2Y1Q8NGV0 311 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 OR51A7Q8NH64 312 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 MR1Q95460 341 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 LIN37Q96GY3 246 aaPredicted RBP7.24□□□□□ -1.25
VMA21-203ENST00000477649 NECAB3Q96P71 396 aaPredicted RBP7.24□□□□□ -1.25
VMA21-203ENST00000477649 OPALINQ96PE5 141 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 ERMAPQ96PL5 475 aaPredicted RBP7.24□□□□□ -1.25
VMA21-203ENST00000477649 OR5M11Q96RB7 305 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 TNFRSF13CQ96RJ3 184 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 MNTQ99583 582 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 SH3GL3Q99963 347 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 ARHGAP9Q9BRR9 750 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 DEFB126Q9BYW3 111 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 ARRDC1-AS1Q9H2J1 176 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 CPNE5Q9HCH3 593 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 MMP25Q9NPA2 562 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 NRIP3Q9NQ35 241 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 ASB6Q9NWX5 421 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 SLC39A1Q9NY26 324 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 MYOTQ9UBF9 498 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 CRNNQ9UBG3 495 aaPredicted RBP7.24□□□□□ -1.25
VMA21-203ENST00000477649 B3GNT3Q9Y2A9 372 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 GSTK1Q9Y2Q3 226 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 GPR52Q9Y2T5 361 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 CORINQ9Y5Q5 1042 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 ADAMTS20P59510 1910 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 NINQ8N4C6 2090 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 ARID1BQ8NFD5 2236 aaPredicted RBP7.23□□□□□ -1.25
VMA21-203ENST00000477649 IGKV1D-42A0A075B6H8 117 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 A0A075B6Q4 140 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 TRAV27A0A087WT01 109 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 PNMA8CA0A1B0GUJ8 204 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 FAM47E-STBD1D6RA91 191 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 J3QRE1 110 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 CDK2AP1O14519 115 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 PLD2O14939 933 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 ZNF208O43345 1280 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 RFPL3O75679 317 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 NADKO95544 446 aaPredicted RBP7.23□□□□□ -1.25
VMA21-203ENST00000477649 PPP1R3DO95685 299 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 CH25HO95992 272 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 MT-ND5P03915 603 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 HLA-DPB1P04440 258 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 INHBBP09529 407 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 FBXO45P0C2W1 286 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 OR2T7P0C7T2 308 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 ASAH2BP0C7U1 165 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 ZNF806P0C7X5 589 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 LIMS3P0CW19 117 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 LIMS4P0CW20 117 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 SLC2A5P22732 501 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 FGF9P31371 208 aaPredicted RBP7.23□□□□□ -1.25
VMA21-203ENST00000477649 GABRA5P31644 462 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 ETV5P41161 510 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 FOLR3P41439 243 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 GSK3AP49840 483 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 ETV1P50549 477 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 VBP1P61758 197 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 ACTA2P62736 377 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 ACTG2P63267 376 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 FHL1Q13642 323 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 GALEQ14376 348 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 PON3Q15166 354 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.23□□□□□ -1.25
VMA21-203ENST00000477649 ZNF404Q494X3 552 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 XP32Q5T750 250 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 FAM69AQ5T7M9 428 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 TMEM164Q5U3C3 297 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 OPN5Q6U736 354 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 CBLN3Q6UW01 205 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 FAM198BQ6UWH4 519 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 NANOGNBQ7Z5D8 188 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 MARCH3Q86UD3 253 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 PHC2Q8IXK0 858 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 ARMC10Q8N2F6 343 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 SYS1Q8N2H4 156 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 SLC37A3Q8NCC5 494 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 OR2T27Q8NH04 317 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 GPR119Q8TDV5 335 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 ELP5Q8TE02 316 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 HGDQ93099 445 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 TAAR9Q96RI9 348 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 LMF1Q96S06 567 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 TEAD3Q99594 435 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 MED18Q9BUE0 208 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 ASPNQ9BXN1 380 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 ULBP3Q9BZM4 244 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 NXF2Q9GZY0 626 aaKnown RBP7.23□□□□□ -1.25
VMA21-203ENST00000477649 TRIM36Q9NQ86 728 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 ERVK13-1Q9NX77 482 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 TAS2R10Q9NYW0 307 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 PADI1Q9ULC6 663 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 PEX16Q9Y5Y5 336 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 SPIN1Q9Y657 262 aaPredicted RBP7.23□□□□□ -1.25
VMA21-203ENST00000477649 TECTAO75443 2155 aa7.23□□□□□ -1.25
VMA21-203ENST00000477649 UNC13CQ8NB66 2214 aa7.22□□□□□ -1.25
VMA21-203ENST00000477649 CABIN1Q9Y6J0 2220 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms