RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 SLCO4A1Q96BD0 722 aa13.76□□□□□ -0.21
SEC13-215ENST00000477547 ADGRG7Q96K78 797 aa13.76□□□□□ -0.21
SEC13-215ENST00000477547 ARL5BQ96KC2 179 aa13.76□□□□□ -0.21
SEC13-215ENST00000477547 DHRS1Q96LJ7 313 aa13.76□□□□□ -0.21
SEC13-215ENST00000477547 EPYCQ99645 322 aa13.76□□□□□ -0.21
SEC13-215ENST00000477547 TUBA1CQ9BQE3 449 aa13.76□□□□□ -0.21
SEC13-215ENST00000477547 TMEM43Q9BTV4 400 aa13.76□□□□□ -0.21
SEC13-215ENST00000477547 ZNF426Q9BUY5 554 aa13.76□□□□□ -0.21
SEC13-215ENST00000477547 CHID1Q9BWS9 393 aa13.76□□□□□ -0.21
SEC13-215ENST00000477547 ANKRD19PQ9H560 264 aa13.76□□□□□ -0.21
SEC13-215ENST00000477547 YY1AP1Q9H869 796 aa13.76□□□□□ -0.21
SEC13-215ENST00000477547 NMNAT1Q9HAN9 279 aaPredicted RBP13.76□□□□□ -0.21
SEC13-215ENST00000477547 CCM2LQ9NUG4 571 aaPredicted RBP13.76□□□□□ -0.21
SEC13-215ENST00000477547 ALKBH4Q9NXW9 302 aa13.76□□□□□ -0.21
SEC13-215ENST00000477547 TINAGQ9UJW2 476 aa13.76□□□□□ -0.21
SEC13-215ENST00000477547 ZNF835Q9Y2P0 537 aa13.76□□□□□ -0.21
SEC13-215ENST00000477547 HDGFL3Q9Y3E1 203 aa13.76□□□□□ -0.21
SEC13-215ENST00000477547 CXCL13O43927 109 aa13.75□□□□□ -0.21
SEC13-215ENST00000477547 NPIPB7O75200 414 aa13.75□□□□□ -0.21
SEC13-215ENST00000477547 GADD45GO95257 159 aa13.75□□□□□ -0.21
SEC13-215ENST00000477547 GNLYP22749 145 aa13.75□□□□□ -0.21
SEC13-215ENST00000477547 COL8A1P27658 744 aa13.75□□□□□ -0.21
SEC13-215ENST00000477547 CLK1P49759 484 aaKnown RBP13.75□□□□□ -0.21
SEC13-215ENST00000477547 UGT2B15P54855 530 aa13.75□□□□□ -0.21
SEC13-215ENST00000477547 CASP6P55212 293 aa13.75□□□□□ -0.21
SEC13-215ENST00000477547 CLDN15P56746 228 aa13.75□□□□□ -0.21
SEC13-215ENST00000477547 EGR4Q05215 589 aa13.75□□□□□ -0.21
SEC13-215ENST00000477547 GXYLT1Q4G148 440 aa13.75□□□□□ -0.21
SEC13-215ENST00000477547 ACSF3Q4G176 576 aaPredicted RBP13.75□□□□□ -0.21
SEC13-215ENST00000477547 EMC4Q5J8M3 183 aa13.75□□□□□ -0.21
SEC13-215ENST00000477547 OR2T5Q6IEZ7 315 aa13.75□□□□□ -0.21
SEC13-215ENST00000477547 Q6ZPB1 254 aaPredicted RBP13.75□□□□□ -0.21
SEC13-215ENST00000477547 PAPD5Q8NDF8 572 aaKnown RBP13.75□□□□□ -0.21
SEC13-215ENST00000477547 OR2T29Q8NH02 315 aa13.75□□□□□ -0.21
SEC13-215ENST00000477547 TMEM239Q8WW34 195 aa13.75□□□□□ -0.21
SEC13-215ENST00000477547 PYDC1Q8WXC3 89 aa13.75□□□□□ -0.21
SEC13-215ENST00000477547 KTI12Q96EK9 354 aaPredicted RBP13.75□□□□□ -0.21
SEC13-215ENST00000477547 ZNF845Q96IR2 970 aaPredicted RBP13.75□□□□□ -0.21
SEC13-215ENST00000477547 TP63Q9H3D4 680 aaPredicted RBP13.75□□□□□ -0.21
SEC13-215ENST00000477547 HIVEP3Q5T1R4 2406 aa13.75□□□□□ -0.21
SEC13-215ENST00000477547 TRAV36DV7A0A075B6V5 113 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 TRGV8A0A0C4DH27 118 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 TRBV4-1A0A0J9YWV2 114 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 A0A1W2PRQ8 180 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 CLCA1A8K7I4 914 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 SULT2B1O00204 365 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 PIP5K1CO60331 668 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 TIPRLO75663 272 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 CST1P01037 141 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 GABRA1P14867 456 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 ACVR2AP27037 513 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 GTF2E2P29084 291 aaKnown RBP13.74□□□□□ -0.21
SEC13-215ENST00000477547 PTGER4P35408 488 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 RPS5P46782 204 aaKnown RBP13.74□□□□□ -0.21
SEC13-215ENST00000477547 DIO1P49895 249 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 SMIM11AP58511 58 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 CSNK2A1P68400 391 aaPredicted RBP13.74□□□□□ -0.21
SEC13-215ENST00000477547 DGCR6Q14129 220 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 SGCBQ16585 318 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 ZNF239Q16600 458 aaKnown RBP13.74□□□□□ -0.21
SEC13-215ENST00000477547 C1orf185Q5T7R7 199 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 C1QL3Q5VWW1 255 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 LINC00114Q6XXX2 140 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 C3P1Q6ZMU1 363 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 ZNF730Q6ZMV8 503 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 OR52J3Q8NH60 311 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 PFN4Q8NHR9 129 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 ACOT11Q8WXI4 607 aaPredicted RBP13.74□□□□□ -0.21
SEC13-215ENST00000477547 DUS3LQ96G46 650 aaKnown RBP13.74□□□□□ -0.21
SEC13-215ENST00000477547 HS6ST2Q96MM7 605 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 TRIB1Q96RU8 372 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 PTDSS2Q9BVG9 487 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 TAPBPLQ9BX59 468 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 SRXN1Q9BYN0 137 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 POTEKPQ9BYX7 375 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 SLC19A3Q9BZV2 496 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 REEP1Q9H902 201 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 PAQR5Q9NXK6 330 aaPredicted RBP13.74□□□□□ -0.21
SEC13-215ENST00000477547 OSGIN2Q9Y236 505 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 MED31Q9Y3C7 131 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 SAMHD1Q9Y3Z3 626 aaKnown RBP13.74□□□□□ -0.21
SEC13-215ENST00000477547 CRYBG3Q68DQ2 2970 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 CELSR2Q9HCU4 2923 aa13.74□□□□□ -0.21
SEC13-215ENST00000477547 CENPEQ02224 2701 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 ENTPD5O75356 428 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 SYNGR4O95473 234 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 PMS2P2O95744 297 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 IMPDH2P12268 514 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 CA7P43166 264 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 OR2B6P58173 313 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 SF3B4Q15427 424 aaKnown RBP eCLIP13.73□□□□□ -0.215e-8■■■■□ 21.8
SEC13-215ENST00000477547 OR7A5Q15622 319 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 EXOC3L2Q2M3D2 409 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 FAM69AQ5T7M9 428 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 TMPPEQ6ZT21 453 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 DOLPP1Q86YN1 238 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 C10orf53Q8N6V4 93 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 SLC7A13Q8TCU3 470 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 ZPLD1Q8TCW7 415 aa13.73□□□□□ -0.21
SEC13-215ENST00000477547 SSC4DQ8WTU2 575 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms