RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 CCDC159P0C7I6 412 aa26.09■■□□□ 1.77
VEGFA-211ENST00000476772 CXCR4P61073 352 aa26.09■■□□□ 1.77
VEGFA-211ENST00000476772 SNAPC1Q16533 368 aa26.09■■□□□ 1.77
VEGFA-211ENST00000476772 C1orf140Q5VVS0 124 aa26.09■■□□□ 1.77
VEGFA-211ENST00000476772 ZNF248Q8NDW4 579 aa26.09■■□□□ 1.77
VEGFA-211ENST00000476772 OR5M1Q8NGP8 315 aa26.09■■□□□ 1.77
VEGFA-211ENST00000476772 TRUB1Q8WWH5 349 aaKnown RBP26.09■■□□□ 1.77
VEGFA-211ENST00000476772 A0A087WZY1 265 aa26.08■■□□□ 1.77
VEGFA-211ENST00000476772 BHLHE40O14503 412 aa26.08■■□□□ 1.77
VEGFA-211ENST00000476772 IL11P20809 199 aa26.08■■□□□ 1.77
VEGFA-211ENST00000476772 DPP4P27487 766 aa26.08■■□□□ 1.77
VEGFA-211ENST00000476772 MLLT10P55197 1068 aa26.08■■□□□ 1.77
VEGFA-211ENST00000476772 SNRPGP62308 76 aaKnown RBP26.08■■□□□ 1.77
VEGFA-211ENST00000476772 RPS4XP62701 263 aaKnown RBP26.08■■□□□ 1.77
VEGFA-211ENST00000476772 TEKQ02763 1124 aa26.08■■□□□ 1.77
VEGFA-211ENST00000476772 APOFQ13790 326 aa26.08■■□□□ 1.77
VEGFA-211ENST00000476772 OR8J1Q8NGP2 316 aa26.08■■□□□ 1.77
VEGFA-211ENST00000476772 SLC38A2Q96QD8 506 aa26.08■■□□□ 1.77
VEGFA-211ENST00000476772 ZNF552Q9H707 407 aaPredicted RBP26.08■■□□□ 1.77
VEGFA-211ENST00000476772 AKAP13Q12802 2813 aa26.07■■□□□ 1.76
VEGFA-211ENST00000476772 SPTBN2O15020 2390 aa26.07■■□□□ 1.76
VEGFA-211ENST00000476772 EFNA2O43921 213 aa26.07■■□□□ 1.76
VEGFA-211ENST00000476772 ASAH2BP0C7U1 165 aa26.07■■□□□ 1.76
VEGFA-211ENST00000476772 ATP6V1B1P15313 513 aa26.07■■□□□ 1.76
VEGFA-211ENST00000476772 CNR1P21554 472 aa26.07■■□□□ 1.76
VEGFA-211ENST00000476772 DSCR4P56555 118 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-211ENST00000476772 DEFB109BQ30KR1 87 aa26.07■■□□□ 1.76
VEGFA-211ENST00000476772 SGCDQ92629 289 aa26.07■■□□□ 1.76
VEGFA-211ENST00000476772 ZBTB8AQ96BR9 441 aa26.07■■□□□ 1.76
VEGFA-211ENST00000476772 IFT27Q9BW83 186 aa26.07■■□□□ 1.76
VEGFA-211ENST00000476772 PRRG3Q9BZD7 231 aa26.07■■□□□ 1.76
VEGFA-211ENST00000476772 FKRPQ9H9S5 495 aa26.07■■□□□ 1.76
VEGFA-211ENST00000476772 TUBA8Q9NY65 449 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-211ENST00000476772 BLOC1S6Q9UL45 172 aa26.07■■□□□ 1.76
VEGFA-211ENST00000476772 MSRB2Q9Y3D2 182 aa26.07■■□□□ 1.76
VEGFA-211ENST00000476772 LRRC3CA6NJW4 275 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 CBR3O75828 277 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 NDUFB2O95178 105 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 SLC6A6P31641 620 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 CCL11P51671 97 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 EFNB1P98172 346 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 FAM69AQ5T7M9 428 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 C5orf46Q6UWT4 87 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 ATP6V1C2Q8NEY4 427 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 TEX12Q9BXU0 123 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 HES7Q9BYE0 225 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 MRPS26Q9BYN8 205 aaKnown RBP26.06■■□□□ 1.76
VEGFA-211ENST00000476772 ZNF229Q9UJW7 825 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 DKKL1Q9UK85 242 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 PINLYPA6NC86 204 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 SURF4O15260 269 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 ZNF208O43345 1280 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 TLX2O43763 284 aaPredicted RBP26.06■■□□□ 1.76
VEGFA-211ENST00000476772 FAM20BO75063 409 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 AHSA1O95433 338 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 HK1P19367 917 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 EEF1B2P24534 225 aaKnown RBP26.06■■□□□ 1.76
VEGFA-211ENST00000476772 EIF1P41567 113 aaKnown RBP26.06■■□□□ 1.76
VEGFA-211ENST00000476772 NUDT6P53370 316 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 MFAP5Q13361 173 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 SLC43A2Q8N370 569 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 LNX2Q8N448 690 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 RHNO1Q9BSD3 238 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 PAK1IP1Q9NWT1 392 aaPredicted RBP26.06■■□□□ 1.76
VEGFA-211ENST00000476772 CLN6Q9NWW5 311 aa26.06■■□□□ 1.76
VEGFA-211ENST00000476772 RPH3AQ9Y2J0 694 aaPredicted RBP26.06■■□□□ 1.76
VEGFA-211ENST00000476772 OR5H15A6NDH6 313 aa26.05■■□□□ 1.76
VEGFA-211ENST00000476772 PPP1R3DO95685 299 aa26.05■■□□□ 1.76
VEGFA-211ENST00000476772 ADH6P28332 368 aa26.05■■□□□ 1.76
VEGFA-211ENST00000476772 GRK5P34947 590 aa26.05■■□□□ 1.76
VEGFA-211ENST00000476772 GABARAPL2P60520 117 aa26.05■■□□□ 1.76
VEGFA-211ENST00000476772 IGFN1Q86VF2 1251 aa26.05■■□□□ 1.76
VEGFA-211ENST00000476772 MOSPD2Q8NHP6 518 aa26.05■■□□□ 1.76
VEGFA-211ENST00000476772 SLC25A36Q96CQ1 311 aa26.05■■□□□ 1.76
VEGFA-211ENST00000476772 DDIT4LQ96D03 193 aa26.05■■□□□ 1.76
VEGFA-211ENST00000476772 ARL5BQ96KC2 179 aa26.05■■□□□ 1.76
VEGFA-211ENST00000476772 SERINC1Q9NRX5 453 aa26.05■■□□□ 1.76
VEGFA-211ENST00000476772 SCN3BQ9NY72 215 aa26.05■■□□□ 1.76
VEGFA-211ENST00000476772 DNAJC27Q9NZQ0 273 aa26.05■■□□□ 1.76
VEGFA-211ENST00000476772 HIF3AQ9Y2N7 669 aa26.05■■□□□ 1.76
VEGFA-211ENST00000476772 GPR52Q9Y2T5 361 aa26.05■■□□□ 1.76
VEGFA-211ENST00000476772 MCIDASD6RGH6 385 aa26.04■■□□□ 1.76
VEGFA-211ENST00000476772 BLOC1S5-TXNDC5H3BN57 136 aa26.04■■□□□ 1.76
VEGFA-211ENST00000476772 CDK2AP1O14519 115 aa26.04■■□□□ 1.76
VEGFA-211ENST00000476772 HMGN1P05114 100 aa26.04■■□□□ 1.76
VEGFA-211ENST00000476772 TMEM201Q5SNT2 666 aa26.04■■□□□ 1.76
VEGFA-211ENST00000476772 BCDIN3DQ7Z5W3 292 aaKnown RBP26.04■■□□□ 1.76
VEGFA-211ENST00000476772 FDCSPQ8NFU4 85 aa26.04■■□□□ 1.76
VEGFA-211ENST00000476772 TMEM163Q8TC26 289 aa26.04■■□□□ 1.76
VEGFA-211ENST00000476772 UBL7Q96S82 380 aaPredicted RBP26.04■■□□□ 1.76
VEGFA-211ENST00000476772 AMBNQ9NP70 447 aa26.04■■□□□ 1.76
VEGFA-211ENST00000476772 PTGES3LE9PB15 166 aa26.03■■□□□ 1.76
VEGFA-211ENST00000476772 H3BML4 177 aa26.03■■□□□ 1.76
VEGFA-211ENST00000476772 ZIC3O60481 467 aa26.03■■□□□ 1.76
VEGFA-211ENST00000476772 ENTPD6O75354 484 aa26.03■■□□□ 1.76
VEGFA-211ENST00000476772 SLC2A10O95528 541 aa26.03■■□□□ 1.76
VEGFA-211ENST00000476772 MT-ATP6P00846 226 aa26.03■■□□□ 1.76
VEGFA-211ENST00000476772 AQP2P41181 271 aa26.03■■□□□ 1.76
VEGFA-211ENST00000476772 MAP2K6P52564 334 aa26.03■■□□□ 1.76
VEGFA-211ENST00000476772 PRPS1P60891 318 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms