RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 BNIP2Q12982 314 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 SQLEQ14534 574 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 SLC17A1Q14916 467 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 ZSWIM7Q19AV6 140 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 MSMPQ1L6U9 139 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 TBRG1Q3YBR2 411 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 C6orf136Q5SQH8 315 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 LIPNQ5VXI9 398 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 THSD4Q6ZMP0 1018 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 GRINAQ7Z429 371 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 CDK20Q8IZL9 346 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 FNDC5Q8NAU1 212 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 SEMA6DQ8NFY4 1073 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 OR4A15Q8NGL6 344 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 XAGE5Q8WWM1 108 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 SLC38A2Q96QD8 506 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 RHOXF2Q9BQY4 288 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 LPAR2Q9HBW0 351 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 ZDHHC2Q9UIJ5 367 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 TMEFF2Q9UIK5 374 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-219ENST00000476625 OSGIN1Q9UJX0 560 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 SLC9A8Q9Y2E8 581 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 TENM1Q9UKZ4 2725 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 TMEM129A0AVI4 362 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 TMEM114B3SHH9 223 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 NDUFS8O00217 210 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 GPR171O14626 319 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 WNT9BO14905 357 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 TRIM13O60858 407 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 UPK3AO75631 287 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 SEC14L2O76054 403 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 CPSF4O95639 269 aaKnown RBP10.38□□□□□ -0.75
HDAC6-219ENST00000476625 CHEK2O96017 543 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 KRT16P08779 473 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 DAOP14920 347 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 EGR1P18146 543 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 KRT4P19013 534 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 MPGP29372 298 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 THBS4P35443 961 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 CEACAM7Q14002 265 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 OR7A5Q15622 319 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 SYPL1Q16563 259 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 LSM12Q3MHD2 195 aaKnown RBP10.38□□□□□ -0.75
HDAC6-219ENST00000476625 OTUD3Q5T2D3 398 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-219ENST00000476625 DEF8Q6ZN54 512 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 AAED1Q7RTV5 226 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 GPAT4Q86UL3 456 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 C17orf78Q8N4C9 275 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 RFLNBQ8N5W9 214 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 ANKFN1Q8N957 763 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 C1orf162Q8NEQ5 155 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-219ENST00000476625 OR9K2Q8NGE7 335 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 OR1K1Q8NGR3 316 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 ARL8AQ96BM9 186 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 ROPN1LQ96C74 230 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 PLK3Q9H4B4 646 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 OCEL1Q9H607 264 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 METTL17Q9H7H0 456 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-219ENST00000476625 HDGFL3Q9Y3E1 203 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 WDR45Q9Y484 360 aa10.38□□□□□ -0.75
HDAC6-219ENST00000476625 hCG_2039718K7EN88 272 aa10.37□□□□□ -0.75
HDAC6-219ENST00000476625 SPAG7O75391 227 aa10.37□□□□□ -0.75
HDAC6-219ENST00000476625 LYPLA1O75608 230 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-219ENST00000476625 CHRM4P08173 479 aa10.37□□□□□ -0.75
HDAC6-219ENST00000476625 BMP4P12644 408 aa10.37□□□□□ -0.75
HDAC6-219ENST00000476625 CDH15P55291 814 aa10.37□□□□□ -0.75
HDAC6-219ENST00000476625 SLC35A1P78382 337 aa10.37□□□□□ -0.75
HDAC6-219ENST00000476625 KCNJ10P78508 379 aa10.37□□□□□ -0.75
HDAC6-219ENST00000476625 NAAAQ02083 359 aa10.37□□□□□ -0.75
HDAC6-219ENST00000476625 GPAT3Q53EU6 434 aa10.37□□□□□ -0.75
HDAC6-219ENST00000476625 KLHL24Q6TFL4 600 aa10.37□□□□□ -0.75
HDAC6-219ENST00000476625 SSX8Q7RTT4 187 aa10.37□□□□□ -0.75
HDAC6-219ENST00000476625 KDM8Q8N371 416 aa10.37□□□□□ -0.75
HDAC6-219ENST00000476625 ARFGAP2Q8N6H7 521 aa10.37□□□□□ -0.75
HDAC6-219ENST00000476625 BCL2L2Q92843 193 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-219ENST00000476625 PPP3R2Q96LZ3 170 aa10.37□□□□□ -0.75
HDAC6-219ENST00000476625 ATAD3AQ9NVI7 634 aa10.37□□□□□ -0.75
HDAC6-219ENST00000476625 SEC14L4Q9UDX3 406 aa10.37□□□□□ -0.75
HDAC6-219ENST00000476625 SPIN1Q9Y657 262 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-219ENST00000476625 FAM157AC9JC47 383 aa10.36□□□□□ -0.75
HDAC6-219ENST00000476625 SCN2BO60939 215 aa10.36□□□□□ -0.75
HDAC6-219ENST00000476625 FGF4P08620 206 aa10.36□□□□□ -0.75
HDAC6-219ENST00000476625 TACSTD2P09758 323 aa10.36□□□□□ -0.75
HDAC6-219ENST00000476625 GKN3PP0CG01 181 aa10.36□□□□□ -0.75
HDAC6-219ENST00000476625 CREB1P16220 341 aa10.36□□□□□ -0.75
HDAC6-219ENST00000476625 MAPK1P28482 360 aa10.36□□□□□ -0.75
HDAC6-219ENST00000476625 RPL3P39023 403 aaKnown RBP10.36□□□□□ -0.75
HDAC6-219ENST00000476625 CCT5P48643 541 aa10.36□□□□□ -0.75
HDAC6-219ENST00000476625 PPOXP50336 477 aa10.36□□□□□ -0.75
HDAC6-219ENST00000476625 IDH3GP51553 393 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-219ENST00000476625 P2RY4P51582 365 aa10.36□□□□□ -0.75
HDAC6-219ENST00000476625 NAA20P61599 178 aa10.36□□□□□ -0.75
HDAC6-219ENST00000476625 NIPAL3Q6P499 406 aa10.36□□□□□ -0.75
HDAC6-219ENST00000476625 ANKRD16Q6P6B7 361 aa10.36□□□□□ -0.75
HDAC6-219ENST00000476625 SPATA21Q7Z572 469 aa10.36□□□□□ -0.75
HDAC6-219ENST00000476625 LINC01356Q8N9X3 169 aa10.36□□□□□ -0.75
HDAC6-219ENST00000476625 UBLCP1Q8WVY7 318 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-219ENST00000476625 TMEM45BQ96B21 275 aa10.36□□□□□ -0.75
HDAC6-219ENST00000476625 MOAP1Q96BY2 351 aa10.36□□□□□ -0.75
HDAC6-219ENST00000476625 TUBGCP3Q96CW5 907 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms